Clostridioides difficile 630Derm: CD630DERM_31860
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Entry
CD630DERM_31860 CDS
T03785
Name
(GenBank) Transcriptional regulator, sigma-54-dependent
Organism
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Clostridioides difficile 630Derm
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
AAA_2
Mg_chelatase
HTH_7
AAA_19
HTH_8
AAA_7
nSTAND3
AAA_22
IGPS
GAF
bpMoxR
GAF_2
DUF815
AAA_3
AAA_16
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
CEJ99836
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Position
1:complement(3684866..3686671)
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AA seq
601 aa
AA seq
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MLSKLKEFQQEMIKYTETVASVLDVDIEIVDDRLIRISGTGLYKSKINESVVTEGFIYDN
VIQKGQELVVLDICDNQLCIECSHYMKCLNKVIIAVPIKYNNRTIGVIGAISTDKTKKVE
ISAKIDNYLKFVNHICDLISMKIEEHEASKNSSRKMDMMIEIIENVEKGVIILDINSKIS
YINNIALKKLDIDKNIIENIVNIVSVESSSNGHELLEIDIDNKIYNINAKIIPVYPYINQ
YDKIIIFDKTYINHKGHGKVNSGWGNSDIESIIGNSEAMLKVKERTKKLAKSNSTVLITG
ESGTGKELIARAIHAEGSRWNKPFIAINCAAIPENLLESELFGYIKGAFSGASSGGKVGK
FELANEGVIFLDEIGDLSMPLQAKLLRVLQERKFARIGSNKLIDLDIRVIAATNKNLLKL
VNEGKFRDDLYYRLNVIPINLPPLRERKDDIEAIMMKFASKYSLELGIQLNKIEENVMNM
LINYNWPGNIRELENAVEYMMNLVGDDGIIYKDMLPLDILNYYNINGNIYKNKDVNIIFE
DDIVGGIVENQERILSIKELELTYINKLLNKYGRDTKTKKKIAKDLGIGLATLYRKLEEE
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtaaattaaaagaatttcaacaagaaatgataaaatacactgaaacagtagct
agtgtgttagatgtagatattgaaatagttgacgatagattaataagaattagtggcaca
ggtctgtataaatcaaagataaatgaaagcgttgttactgagggctttatttatgacaat
gttatacagaaaggtcaggaattagtcgtattggatatatgtgataatcagctttgtata
gaatgttcccattacatgaaatgcctaaataaagtaataatagcagttccaataaaatat
aataatcgaactataggagtaattggtgctattagtacagataaaactaaaaaagtagaa
ataagtgcaaaaatagataattatttaaaatttgtcaatcatatatgcgatttaatttct
atgaaaatagaagaacatgaagcgtcaaaaaatagcagtagaaaaatggatatgatgata
gaaatcattgaaaatgttgaaaaaggcgttataatactagacataaatagcaaaatatct
tatataaacaatatagctctaaaaaaattagatatagataaaaatataatagaaaatata
gtaaatatagtatctgttgaatcttcctcaaatggacatgaattactagaaattgatatt
gataacaaaatttataatataaatgccaaaataattccggtatatccatatataaatcaa
tacgacaaaataataatatttgacaagacatatatcaatcataaaggacatggaaaagtg
aatagtggttggggaaatagtgatatagagtctataattggaaattcagaagcaatgtta
aaagtaaaagagagaactaagaaattagcaaagtcaaattcaactgtacttataactggg
gaaagtggtacgggtaaagagctaattgctagggctatacatgctgaaggtagcagatgg
aacaagccatttattgcgataaactgtgctgctattccagaaaatctccttgaaagtgag
ctatttggctatataaaaggtgcatttagtggagctagtagtggaggtaaagtaggtaaa
tttgaacttgcaaatgaaggtgttatatttcttgatgaaataggagatttgtcaatgcct
ttacaagcaaagttacttagagttttacaagagagaaaatttgcgagaattgggtcaaat
aaacttatagatttagatataagagtgattgctgctacaaataaaaacttattgaaatta
gtaaatgaaggtaagtttagggatgatttatactatagattaaatgtaattcctataaat
ttgccacctcttagggaaagaaaggatgatattgaggcaataatgatgaagtttgcttct
aaatattctttagaactagggattcagttaaataaaatagaagaaaatgtaatgaatatg
ttgattaactataattggccgggaaatataagggaactggaaaatgcagttgaatatatg
atgaatttggttggagatgatggaataatatataaagatatgcttccattagatatttta
aactattataatattaatggaaatatttataaaaataaggatgtaaatataatatttgaa
gatgatatagttggagggatagtagagaatcaagaaaggatactttcaattaaagaatta
gagttgacttacataaataagttgttgaataagtatggaagagatacaaagacgaagaag
aagatagcaaaagacttaggcataggtttggctacactatatagaaaattggaagaggaa
cagtag
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