Clostridioides difficile 630Derm: CD630DERM_33931
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Entry
CD630DERM_33931 CDS
T03785
Name
(GenBank) Fusion of rumA/CD3393 and CD1844A
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pdf
Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdf03009
]
CD630DERM_33931
Enzymes [BR:
pdf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CD630DERM_33931
Ribosome biogenesis [BR:
pdf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CD630DERM_33931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
RrnaAD
N6_N4_Mtase
Methyltransf_11
CMAS
Methyltransf_4
PCMT
Motif
Other DBs
NCBI-ProteinID:
CEK00100
LinkDB
All DBs
Position
1:complement(3970013..3971647)
Genome browser
AA seq
544 aa
AA seq
DB search
MLSKNEMYIVDIVDIGQGGVGVGKYNGITVFVEGGLIHDKVKVRINKVKKNYAVGDIVEI
IEKSPFRVKRVCSDNLRDCGGCQIQDLDYNKQLEMKTNEVKQVLSRIGKLEDVEVHDTIG
MDNPYRYRNKAQFPIQKNNGIPIIGFYKKKTHDVISTEKCVIQHEINDKIVKIIKTYIRA
YKVSIYDEKTHTGLIRHLVTKIGFTTKEVMVVLVANGNKLPYLKELASVLKENIPGFKTL
VVNVNQKDTNAILGRENIVIYGDGKINDYIGDLVFEISPLSFFQVNPVQTKVLYDKALEY
ANLNDTDTVFDIYCGIGTISLFLAQKAKKVYGIEIIDDAIKDAKINAKLNNIHNAEFYVG
KAEEIVPKMYREGKTANVVVVDPPRKGCDEKVLETIVSMNPERIVYVSCNPSTLARDLDY
LNVHGFKCVEAQPVDMFPHSTHVETVALLSKLGVDKHIDVEIKLDELDLTSAESKATYAQ
IKEYVLEKFGLKVSTLYIAQIKKKCGIEMREHYNKSKKDNQAIPQCTPEKEEAIMDALRH
FKMI
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgaaaaacgagatgtatattgtagatatagtagacattggtcaaggcggagta
ggagtaggaaagtacaatggtattacagtttttgtagagggcggattaatacatgataaa
gttaaagttaggattaataaagtaaagaaaaattatgctgtgggagatattgttgagata
atagaaaagtctccattcagggtgaaaagagtgtgtagtgacaatcttagggattgtgga
gggtgtcagatacaagacttagattataataaacaacttgaaatgaaaacaaatgaagtt
aaacaagtactttcgagaataggtaagttagaggatgtagaagttcatgacactatagga
atggataatccatatagatatagaaataaagcacaatttccaatacaaaagaataatggt
attccaattattggcttctataaaaagaagactcatgatgtaatatcgacagaaaaatgc
gtaatacaacatgagataaatgataaaattgttaaaataataaaaacatatataagggcc
tataaggtaagcatatatgatgaaaagactcacacggggttgattaggcatttagtaaca
aaaataggttttacaactaaagaagtaatggttgtattagtagcaaatggaaacaaactt
ccatatcttaaagaattagcttcagtgcttaaggaaaatatacctggatttaagactttg
gttgtaaatgtaaatcaaaaagatacgaatgctattctaggaagagaaaatatagttata
tatggagatggaaaaataaacgattatataggagacttagtgtttgagatttcaccatta
tcatttttccaagtaaaccctgtccaaactaaagtattgtatgataaggctcttgaatat
gcaaatttaaatgatactgatactgtttttgatatttactgtgggataggtacaatatct
ttatttttggcacaaaaggctaaaaaggtttatggaatagaaattatagatgatgccata
aaagatgctaagataaatgctaaattaaacaatatacataatgctgaattttatgttgga
aaggcagaggaaattgtacctaagatgtatagagagggtaagactgccaatgtagtcgtt
gtagacccacctagaaagggatgtgacgaaaaggtattagagactattgtttcaatgaat
ccggaaagaattgtctatgtttcttgtaatccttctactttagcaagggatttagattat
ctaaatgttcacggatttaaatgtgttgaggcacaacctgtagatatgttccctcattct
acacatgtggagacggtagcattattgtccaaacttggtgtcgataagcatatagatgtt
gaaattaagctggatgagcttgatttgacaagtgcagagagtaaagcaacatacgctcaa
atcaaggagtatgtattagaaaaatttggactaaaagtttctacactctatattgcacaa
attaaaaagaaatgtgggattgaaatgagagaacattataataaatctaaaaaagataat
caggctatcccacagtgtacgcctgaaaaagaagaagctatcatggatgctttaagacat
tttaaaatgatttag
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