Clostridioides difficile 630Derm: CD630DERM_34000
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Entry
CD630DERM_34000 CDS
T03785
Name
(GenBank) upf0042 nucleotide-binding proteinhmpref0220_2799
KO
K06958
RNase adapter protein RapZ
Organism
pdf
Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdf03019
]
CD630DERM_34000
Messenger RNA biogenesis [BR:
pdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CD630DERM_34000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
AAA_28
SKI
HTH_58
Motif
Other DBs
NCBI-ProteinID:
CEK00109
UniProt:
A0A031WC31
LinkDB
All DBs
Position
1:complement(3981104..3981961)
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AA seq
285 aa
AA seq
DB search
MKFVIVTGLSGSGKSETMRALEDMGFYCVDNLPPALITKFAELCYQPNSSIDKVALGIDI
RGRKFFEALHESLNYLEKENYEYEMVYLDCNDDVLLKRYKMTRRNHPLAKDMQIPEGIKM
ERKIMEPLKELSTCIIDTTNMKPKDLKEEIKKIYSSGEDNPNLTISVVSFGFKHGILADA
DLVFDVRFLPNPYYVEELRAKTGDDKEVRDYVMNSKISEEFYVKLLDMIHFLVPQYIEEG
KQHLVIGVGCTGGRHRSVTITNLIAEDLSNKGYRVVKKHRDSMLR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttatagttacaggtctttcaggatctggaaaaagtgagacaatgagagct
ttagaggatatgggattttattgtgtagataatctacctcctgctttgataactaaattt
gcagaattatgttatcaaccaaattcaagtattgataaagttgctctagggatagatata
agagggagaaagttttttgaagcgcttcatgaaagcttaaattatttagaaaaagaaaat
tatgaatatgaaatggtatatttggattgtaatgatgatgtattgctaaagagatataaa
atgacaagaagaaatcatccattggcaaaagatatgcagattccagaaggtataaaaatg
gaaagaaagataatggaacctttaaaggagttatctacatgtataattgatacaactaac
atgaaacctaaagaccttaaggaagaaataaagaaaatatattcttctggtgaagataat
ccaaacctaactatttctgtagtatcttttggatttaaacatggtatacttgctgatgca
gatttagtatttgatgtaagatttcttccaaatccctattatgttgaagagttaagagct
aaaactggtgatgataaagaagttagagattatgttatgaattctaaaatcagtgaagaa
ttttatgtgaaacttttagatatgattcattttttagtacctcaatatatagaggaagga
aaacaacatctagtaattggtgttggatgcacaggtggaagacataggtcagttactata
acaaatcttatagcggaggatttatctaataagggatatagagttgtaaagaaacataga
gactctatgttgcgataa
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