Clostridioides difficile 630Derm: CD630DERM_34870
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Entry
CD630DERM_34870 CDS
T03785
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD630DERM_34870 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdf03021
]
CD630DERM_34870 (rho)
03019 Messenger RNA biogenesis [BR:
pdf03019
]
CD630DERM_34870 (rho)
Transcription machinery [BR:
pdf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CD630DERM_34870 (rho)
Messenger RNA biogenesis [BR:
pdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CD630DERM_34870 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_25
OB_RNB
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
CEK00201
UniProt:
A0A031WHL4
LinkDB
All DBs
Position
1:complement(4077159..4078748)
Genome browser
AA seq
529 aa
AA seq
DB search
MILDDKVLEGLGSKTLVELREIAKELKIKSITTYKKNELIEIINSKSKNEEKVNEETKEK
NEDIKEDIKNRKENIERESIEKEVEYKSPTKSYNKKEIDTQNISQNQEHRNQRNDYNKTT
SVNDSNKSSNISNRMVRNNNKNYYMPKQVDESKIVDEFNTSKEDEVVGVLEILPDGFGFL
RGSNYLSTEGDVYVSPSQIRRFNMKTGDKIKGITRHPKSGEKFRALLYVQKINDENPDTA
IQRNAFETLTPIFPEERLTLETNRNEIATRIIDLISPIGKGQRGLIVAPPKAGKTVLLKS
VANSIAKNHPNVELIVLLIDERPEEVTDMKESIEGDVIYSTFDQVSSHHVKVAEMVLNRA
QRLVEHGKDVVILLDSITRLARAYNLTISPTGRTLSGGIDPGALHGPKKFFGAARNIRQG
GSLTILGTALVETGSRMDDVIFEEFKGTGNMELHLDRKLAEKRIFPAIDIYKSGTRRDDL
LLDDEEKTALWRLRREMSNNSVMEITDKVIELIKRTKDNKEFVKSIKNL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttgattttagatgataaagtattagaaggattaggtagtaagaccttagttgagctacga
gagatagctaaagaattaaaaataaaatcaattactacatataagaaaaatgagttaatt
gagattataaattccaaaagtaaaaatgaggaaaaagtaaacgaagagactaaagaaaaa
aatgaagatattaaagaagacataaagaatagaaaagaaaatatagagcgtgaaagtata
gaaaaagaagttgaatataagagccctaccaaatcatacaacaagaaagaaatagatacc
caaaatatttcccaaaaccaagaacatagaaatcaaagaaatgactataataagacaacg
agtgtaaatgatagtaataagtcatcaaatatatctaatagaatggtcagaaataataat
aaaaactattatatgcctaaacaagttgatgaatctaagatagtagatgaatttaacaca
tcaaaagaggatgaagtagtaggtgtacttgaaattctaccagatggatttggtttttta
agaggttcaaattatttgtctactgaaggagatgtttacgtttcaccatctcaaataaga
agatttaatatgaaaacaggagacaagattaagggaataactagacatccaaaaagtgga
gagaaatttagagcacttttatatgttcaaaaaataaatgatgaaaaccctgacacagct
atacaaagaaatgcgtttgagacattaacaccaatatttccagaagaacgacttacactg
gaaactaatagaaatgaaatagctacaagaattatagatttaatttcacctataggaaaa
ggacaaagaggattgatagtagcacctccaaaagctgggaaaacagttcttttaaaaagc
gttgcaaatagcatagctaaaaatcatccaaatgttgaacttatagtactccttatagat
gaaagaccagaggaagttactgatatgaaagaatctattgaaggagacgttatatattcc
acttttgaccaagtatcaagtcatcatgtcaaggttgcagagatggtgttaaatagagct
caaagattagttgaacatggtaaagatgtagtaattttactagatagtataactagattg
gcaagggcatataaccttacaatatctcctacaggtagaactttatctggaggtattgac
cctggtgcacttcatggacctaaaaagttctttggtgcagcaaggaatattagacagggt
ggttctttgacaatattaggaacagcattggttgaaactggttctaggatggatgatgta
atatttgaggaatttaaaggtacaggaaatatggagctacatttagatagaaaattagca
gaaaaaagaatattccctgcaatagatatttacaagtctggtacaagaagagatgattta
ttgcttgatgatgaagaaaagactgctctttggagattaagaagagaaatgagtaataat
tcagtaatggaaattacagataaagtcattgaacttataaagagaactaaggacaataaa
gagtttgtaaaatcaataaagaatttgtaa
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