Clostridioides difficile 630Derm: CD630DERM_34960
Help
Entry
CD630DERM_34960 CDS
T03785
Symbol
hupA
Name
(GenBank) Non-specific DNA-binding protein HBsu; signalrecognition particle-like (SRP) component
KO
K03530
DNA-binding protein HU-beta
Organism
pdf
Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdf03032
]
CD630DERM_34960 (hupA)
03036 Chromosome and associated proteins [BR:
pdf03036
]
CD630DERM_34960 (hupA)
03400 DNA repair and recombination proteins [BR:
pdf03400
]
CD630DERM_34960 (hupA)
DNA replication proteins [BR:
pdf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CD630DERM_34960 (hupA)
Chromosome and associated proteins [BR:
pdf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CD630DERM_34960 (hupA)
DNA repair and recombination proteins [BR:
pdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CD630DERM_34960 (hupA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Peptidase_C80
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CEK00210
LinkDB
All DBs
Position
1:complement(4087534..4087812)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKAELVSKMAEKSGLTKKEAEAALNAFMSSVQDALVNNEKVQLVGFGTFETRERAARQG
RNPRDPEQVIDIPASKAPVFKAGKGLKDIING
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagctgaattagtatcaaagatggcagaaaaaagtggattaacaaagaaggaa
gcagaagctgcgttaaacgcatttatgagttctgttcaagatgcactagtaaataatgaa
aaagttcaattagttggatttggaacatttgagacaagagaaagagctgctagacaagga
agaaatccaagagatccagagcaagttatagatataccagcttctaaagcaccagttttc
aaagctggaaaaggattaaaggatataataaatggataa
DBGET
integrated database retrieval system
