Planococcus donghaensis: BCM40_03180
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Entry
BCM40_03180 CDS
T04451
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdg
Planococcus donghaensis
Pathway
pdg00260
Glycine, serine and threonine metabolism
pdg00460
Cyanoamino acid metabolism
pdg00630
Glyoxylate and dicarboxylate metabolism
pdg00670
One carbon pool by folate
pdg00680
Methane metabolism
pdg01100
Metabolic pathways
pdg01110
Biosynthesis of secondary metabolites
pdg01120
Microbial metabolism in diverse environments
pdg01200
Carbon metabolism
pdg01230
Biosynthesis of amino acids
pdg01240
Biosynthesis of cofactors
pdg04981
Folate transport and metabolism
Module
pdg_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BCM40_03180
09102 Energy metabolism
00680 Methane metabolism
BCM40_03180
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BCM40_03180
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BCM40_03180
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BCM40_03180
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BCM40_03180
Enzymes [BR:
pdg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BCM40_03180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
SelA
Motif
Other DBs
NCBI-ProteinID:
ANU22412
UniProt:
A0A1C7EGC6
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All DBs
Position
complement(2648833..2650068)
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AA seq
411 aa
AA seq
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MELIKAQDPAVYEAMNAEKERQEANIELIASENFVSQAVMDAQGSVLTNKYAEGYPGKRY
YGGCEHVDVVENIARDRLKEIFGAEHANVQPHSGSQANMAVYTAVLDKGDTILGMNLNHG
GHLTHGSKVNFSGMQYNFVEYGVTEEEQLVDYEAVRQAALEHKPKMVVAGASAYSRQLDF
AKFREIADEVGAYLMVDMAHIAGLVATGAHPNPVPHAHFVTSTTHKTLRGPRGGLILCKE
EFAKKIDKTIFPGIQGGPLMHVIAAKAVAFGEAQKPEFKTYIEQVVKNADALAKELIAEG
VNIVSGGTDNHLLLLDLRSLNLTGKVAEHVLDEVGITTNKNTIPFDPESPFVTSGIRLGT
AAVTSRGFKEEDMKEIAAIMAMLLKNPEDENSKKEAAERVAKLTAAHPLYK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaattgattaaggcgcaagacccagcagtatatgaagcgatgaatgcagagaaagaa
agacaggaagcgaacatcgaattgatcgcttcggaaaactttgtttcacaagcggtaatg
gatgcacaaggatcggtgttaacaaacaaatatgcagaaggctatccgggcaaacgctat
tacggaggctgtgaacatgtagacgttgtggaaaacatcgctcgcgaccgtctgaaagaa
atttttggtgcggaacatgcgaacgttcaaccccattctggatcacaggccaacatggct
gtttatacagcagttctagataaaggggatacgattcttggaatgaacttgaaccatggt
ggacatttgacgcatggtagtaaagtgaattttagtgggatgcaatataatttcgttgag
tatggcgtgactgaagaagagcaattggttgattacgaggcggttcgtcaagcggcattg
gaacataagccaaaaatggttgtagctggagcaagcgcatattctcgtcaattagatttt
gctaaattccgtgaaattgctgatgaagtcggtgcatatttgatggtggatatggctcat
atcgccggtctagttgctactggtgctcatccaaacccagttccacatgctcattttgtt
acatcgactacgcataaaacgcttcgtggcccacgcggtggattgattctctgcaaagag
gaatttgcgaaaaaaatcgataaaacaattttccctggaattcaaggcggcccgctaatg
cacgtaattgcagcaaaagctgttgcattcggtgaagcgcaaaagccagaattcaaaacg
tatattgaacaagtcgtgaaaaatgctgacgcattggcaaaagagctaatcgcagaaggt
gtaaatatcgtctctggcggcacagacaatcacttgctgttgcttgaccttcgctcgtta
aacttgacggggaaagttgcagaacatgttcttgatgaagttggtattacgacaaataaa
aataccattcctttcgatccggaaagtccatttgttacttctggtattcgtctaggaact
gctgccgttacatctcgtggatttaaagaagaagatatgaaagaaattgctgcaatcatg
gcaatgcttctgaaaaatccagaagatgaaaatagcaaaaaagaagctgcagaacgtgtt
gcaaagttaactgctgcgcacccgttatataaataa
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