Planococcus donghaensis: BCM40_04610
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Entry
BCM40_04610 CDS
T04451
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdg03400
]
BCM40_04610
Enzymes [BR:
pdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCM40_04610
DNA repair and recombination proteins [BR:
pdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BCM40_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ANU22680
UniProt:
A0A1C7EFP9
LinkDB
All DBs
Position
complement(2315278..2318754)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSLRIVYGRAGAGKTRFVQEEIVDELKRQADGDPIFLIVPDQMSFSTEYRLAAAYNMNGM
IRAQAVTFKRLAWRVLQEVGGISRREVDTFGYRMLIRSLLEDHREEFQLFRRAAGKRGFT
DQIEQLVKEFARYCVDCGELNAIRSSLSEAGAPKTLLDKAGDLELILTEIEDRLGKVFVD
SEGHLALLSEKIPHSELIKSSTIYIDGFVTFTAREYEILFELMKQAKSVTIALPMDNQTD
PNDEQTLFYQSANTARRLTEQAAKEGIEIENSVHLALPRRFMNPELEHIERHFDDFPTRK
IQGKNAVSLVEASNRRAEMHAVARAIREQVRNGFRYNEIAILYRQPEIYDELINTIFPQY
EIPYFISQKKSMLHHPLIEFSRSVLESVVSNYSYEAIFRAVKTDLFFPQGPATKWRERSD
LLENFVIANGIYGERWFDEKRWFYKKYRGLEFHTSIQTDEELAAQVELHAVRDLIREPLA
QLKEQLKLSKTGRDIAESLFLFIEKMDVYAKIQDIREREESEHRLLAATEHEQAWNQWVG
VLDQFVLMFGDKKVDLPTAVKILDEGFETLEFSRIPPSLDQVMVSKIDLARLMDIKSVFV
VGANDGVLPKRIEQEGLLTDTDREWFAQIGFELAPTSKMRLMDETYMVYRAFTSASDLLT
VSFPIADEEGKALLPSLYIQKLKDMLAIETIPAVIDPEELVDASAMDYISHPRASLAYLT
SQIRGGELSAEWRAVYHYYEDDPFWSSIIKRILSPIKPNKADPLREAIAEPLYGTPISSS
VSRVETYYGCPFAHYVAYGLRLEERSQYKLAAPAMGDLFHAAIKWISDEVLRLGVSWSSL
TQTQCRNLAKEAIDQLSPYFVNHILISSHRYRYIQHKLEGIIRQTAYMLSKHAKVSGFVP
IALEVGFGPKETIPPLEISLDRGRKMNVRGRIDRIDSTEIQGKPYLRIVDYKSSKQGLDL
SNVYHGLSLQTFTYLDVALTHSERWLGEEAEPAGVLYFHMHNPMLKLTKLLTAEELDEEM
AKSFKMNGLVVEDPEVIEAMDNQIDGYSNVIPVRLNKSGTVSASQSKTVMKDDMQAVRRF
VRNKHQNAGNGILEGDTSITPYKMKEDTPCQFCSYRSVCQFDPADPDQSYRKLTPLSPDK
AVELIRKETAANDTEKTN
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
gtgtcattacgcattgtttatggcagggcaggagcggggaaaactcgttttgttcaagaa
gaaatcgtagatgagttaaagcgacaagcagatggggatccgatattccttatcgtaccg
gaccaaatgtctttttctactgaatatcgactagctgcggcatacaatatgaatggcatg
attcgcgcacaagcagtaacatttaagcgattggcttggcgggtacttcaagaagttggt
gggataagtaggagagaagtagatacttttggttaccgaatgttaattcgaagcctgctc
gaagatcatcgagaggaattccaattatttcgaagagctgcaggcaaaagaggatttacc
gatcaaatcgagcaattggtgaaagaatttgcacgttattgtgtagattgtggagaatta
aatgccatccgttcttcattaagtgaggcgggggcaccaaaaactttgctcgacaaagca
ggggacctggagttaatcctgacagaaattgaagaccgtttaggaaaagtgtttgtggat
tctgaaggtcatttagcgctactaagcgagaaaatcccccattctgagttgatcaaatcg
tcgacaatttacatcgatggttttgttacatttacagcaagagaatatgaaattcttttt
gaattaatgaagcaagcgaaatcagtaaccatagcattgccaatggataaccaaaccgat
ccaaatgacgagcaaactttattctatcagtctgctaataccgcacgcaggttaactgaa
caagctgcaaaagagggaatcgaaattgaaaattcggttcacttagctttgccgcgtcgt
tttatgaatccagagcttgaacatattgaacgtcattttgatgatttcccaacaaggaaa
atacaagggaagaacgctgtctctttagtggaagcatcaaatagaagagctgaaatgcat
gcagtagcccgagcaataagagaacaagtaagaaatggctttcgttacaatgaaattgct
attctctacagacaacctgaaatttatgatgaattgatcaataccattttcccacaatac
gaaattccgtattttattagtcagaaaaagtccatgcttcatcatccattaattgaattt
agtcgttcggttcttgaatcagtggtttctaattattcctatgaagcaatttttcgagct
gtcaaaacagatttattctttccgcaaggtcctgctacaaaatggcgggaaagaagcgat
ttactagagaattttgttattgccaatggaatttacggtgaacgttggtttgatgaaaaa
cgttggttttataaaaaataccgcggcttggaatttcatacatcgatacaaacagatgaa
gaactagcggcacaagtagagcttcatgcagtacgtgatttaataagagaacctttagcc
cagttaaaagaacaactaaaactgagtaaaacagggcgagatatagcagagtcgttgttt
ctttttatagaaaaaatggatgtctatgcaaaaattcaagatatacgagaacgagaagaa
agtgaacatcgcttactagccgcaacagagcacgagcaggcttggaaccaatgggttggc
gtattagatcaatttgtattaatgtttggcgacaaaaaagtggatttgccaacagctgta
aaaattttagacgaaggatttgagacgttagagttttcacgtattccgccttcgttagat
caagtgatggtatcaaaaatcgatttggctcgtttaatggatataaagtcggtttttgtt
gtcggagctaatgacggtgtcttgccaaagcgtatcgagcaggaagggttattaacagac
acagaccgtgaatggtttgctcaaattggctttgagttggcgcctacttcgaaaatgcgt
ttaatggacgagacctatatggtatatcgtgcttttacatcagcgtctgatttattaact
gtttcgtttccaatcgcagatgaagaaggaaaagccttgttgccttctctttatattcaa
aaattaaaagatatgttggcaattgaaacaattccggcagttattgatccggaagaactt
gtggatgcatcggctatggattacatttcgcatccgagagcgagtttagcatacttaact
tcgcaaatacgcggtggtgaattatcagcagagtggcgtgcggtttatcactattatgag
gacgatccgttttggtcttctattattaaacgcatcttatcgccaatcaaaccaaataaa
gcagatcctcttcgtgaggctattgcagaaccgttgtatggaacacctatctcttctagc
gtatctagggtagaaacgtattatggctgtccatttgcacattatgtagcttatggttta
cgtctcgaagaaagaagccaatacaaattagcagctcctgcaatgggggatcttttccat
gcggcgattaaatggatatcagatgaagtgttacgattaggggtatcatggtcttcgcta
acccaaactcaatgccgtaacttagcgaaagaagcgatcgatcaactttctccttatttc
gttaatcatatcttaatcagttcgcatcgctatcgctatatacaacataaactagaaggt
attattcgccaaaccgcgtatatgctcagcaagcatgctaaagtttcggggtttgtaccg
attgcactagaagttggatttggaccaaaagagacgattccgcctctggaaatttcttta
gatcgaggacgcaagatgaacgtgcgaggtcgtattgatcgaatcgattctactgaaatt
cagggcaaaccttatttgcgtattgtcgattacaaatcttctaaacaagggcttgatcta
agcaacgtttatcacggtctttctttgcaaacctttacgtatttagatgtggcgttaacc
cattctgaacgttggttaggtgaagaagcagaaccagctggtgtgctgtattttcatatg
cacaatccgatgttaaagctgacgaaattgctgacagctgaagaattagatgaagaaatg
gcaaaatcctttaagatgaatggtttagtcgttgaagatcccgaagtgattgaagcaatg
gataaccaaattgatggttattctaatgtcattccggtaagacttaacaaaagtggtacg
gtgtctgcatctcaatccaaaacagtgatgaaagacgatatgcaagctgtccgccgcttt
gtacgaaacaagcatcaaaatgcaggaaatggcatcttagaaggcgatacaagtattacg
ccctataagatgaaagaagatacaccttgtcaattttgctcttatcgctcagtgtgccaa
ttcgacccagcagacccagaccaaagctaccgaaaactaacccctttatctccggataaa
gctgtggaattgatcagaaaggagaccgctgcaaatgataccgaaaaaaccaattga
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