Planococcus donghaensis: BCM40_04925
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Entry
BCM40_04925 CDS
T04451
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdg03021
]
BCM40_04925
Transcription machinery [BR:
pdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCM40_04925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
APAF1_C
Motif
Other DBs
NCBI-ProteinID:
ANU22739
UniProt:
A0A1C7EG02
LinkDB
All DBs
Position
complement(2244632..2245378)
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AA seq
248 aa
AA seq
DB search
MLLASLGWKLGRIEKPDAETMVLQVQAGDEQVLHDLLSYYSPFMRKTASQVCKRYIDDHD
DEYSVALAAFNEAIHKFDQHNNASFLTFAHMVIRRRIIDFIRKESRRDEFSHDFMPASES
EEHNGIADHAATIAYSSEQENHKRSEEIARYEEILQEYNLSFQILVKVSPAHLDARVTAI
QIAQLVAETDEYKQYLLDKKKLPIKEIEKLVKVSRKTIERNRKYIIAMALLQMSDLYYLK
DYLKGRLN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgcttttagcttcattaggctggaaattgggacgaattgaaaaacctgatgctgaaaca
atggtattacaggtacaagctggtgatgagcaggtattgcacgatttgctatcctattac
tcaccatttatgagaaaaacagcatcgcaagtgtgtaaacgatatatcgatgatcatgac
gatgaatatagcgttgccttagcagcatttaatgaagcaatacataaattcgatcaacat
aataatgcatcattcttaacctttgcacatatggttattcgtagacgcataatcgatttt
atacgcaaagaaagcaggcgtgatgagtttagccatgattttatgcccgcatcagagtca
gaagagcataatggtatcgcagatcatgcagcaactattgcttacagtagcgaacaagaa
aatcataagagaagcgaagaaatagcacggtacgaagaaatattacaagaatataatttg
tcgtttcaaatactggttaaagtttctcctgctcatctagatgcccgtgtcacagcgatt
caaatcgctcaattagtggcggaaacagatgagtacaaacaatatttattagataagaag
aaattgcctattaaagaaattgaaaagctagtaaaggtatctcgtaaaacaattgaacga
aatcgaaagtacataattgcaatggccttactacagatgagtgacttgtattacttaaaa
gattatttgaaagggcggttaaactga
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