Planococcus donghaensis: BCM40_05535
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Entry
BCM40_05535 CDS
T04451
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdg
Planococcus donghaensis
Pathway
pdg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BCM40_05535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdg03400
]
BCM40_05535
Enzymes [BR:
pdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCM40_05535
DNA repair and recombination proteins [BR:
pdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCM40_05535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
nSTAND3
T2SSE
AAA_19
PIF1
nSTAND6
NPHP3_N
AAA_30
Zn_ribbon_6
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANU22857
UniProt:
A0A1C7EHK5
LinkDB
All DBs
Position
complement(2122597..2124993)
Genome browser
AA seq
798 aa
AA seq
DB search
MIAEVIVDVAAHPIDRPFDYAIPKRVEVLAEPGMRVKVPFGNRKVLGFITKMKESSDFDP
KRLKPVHELMDVTPVLNEELLQMAQWMKKQTVCFEIDALQVMVPAALRAKYEKRFVLNAT
LEEIAPPLRPYFENRSFIRLQDAVDVYALLKKEMDKGTIVADTDIQQQTAVKKVRMIHIA
ETSEVLEAIEIRANAKQQLKLMEYFLKNTGQSIESSQLQKLAGVSLPTIYSLVDKGAAQI
SNMESYRDPKLLSTIEHKESLQLTGAQQTAFDQIESALNTSKTFLLHGITGSGKTEIYLQ
TIDQVLKQGKEAIMLVPEISLTPQMTIRFKERFGDQVAVLHSGLSAGEKYDEWRKIQRAE
VKVVVGARSAIFAPFQNLGLIILDEEHESSYKQDDSPRYHARDMAIWRSEYHNCPVILGS
ATPSLESYARAQKGVYELLVLEKRAKNQPLPAVHIVDMREELRNGNRSMFSVQLADAIRD
RLEKKQQTVLFLNKRGYSSFVLCRDCGTVMQCPNCDISLTYHRSSEMMKCHYCGYDERVP
TKCPECESEHIRFFGTGTQKVEEELAKVVPEARVLRMDVDTTRTKGAHEKILSAFGEGKA
DILLGTQMIAKGLDFPNITLVGVLSADTTLHLPDFRAAEKTYQLLTQVSGRAGRGVLPGT
VFVQSYTPEHYAITLAKDQLYEPFYEQEMAMRRASGYPPYYFVVNIQFTHEDLMTVAEYA
DQTVRYLKGQLSPNTLIIGPSASLISRVNNRYRYQCLIKYKKESKLIDTMQQLIKIHRTE
WLKKGATLSIDMNPTSVM
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatagctgaagttattgtggacgttgctgcacatccaatagatcggccatttgattac
gccattccaaaaagagtggaagttttggcagagccgggaatgcgtgtgaaagtgccgttt
ggcaatcgcaaagtgcttggatttatcacgaaaatgaaagagtcttctgactttgaccca
aaacggttaaaaccagtccatgaattgatggatgttacaccggtgttaaatgaagaatta
ttgcagatggcacagtggatgaaaaaacaaacagtttgttttgaaattgatgccttacaa
gtgatggtgcctgccgctttacgtgcgaaatatgaaaagcgtttcgtattaaatgcaaca
cttgaagaaattgctccgcctttacgtccgtattttgaaaatcgttcgtttatccggctc
caagatgcagttgatgtctatgccttattaaaaaaagagatggataaagggacaattgtt
gccgatacggatattcagcaacaaacagctgtcaaaaaggtaagaatgattcacattgct
gaaacgagcgaagtacttgaagcaatagaaattcgtgcaaacgccaaacaacaattaaaa
ttaatggagtattttttaaaaaacacaggacaatcaattgaatcgtctcaacttcaaaaa
ttggcaggggtttcattgcctacaatttatagcttagttgataaaggcgcagctcaaata
tcgaatatggagtcttaccgagatccgaaattactatcaactattgaacataaagaatct
ttacagctaacaggcgcgcaacaaactgcttttgatcagattgaatcggcattaaataca
tcaaaaaccttcctgctgcatggcattacagggagtggtaaaacagaaatttacttgcaa
acaatcgatcaagtgctaaaacaaggcaaagaggcgattatgttagtgcccgaaatttct
ttaacgccacaaatgacaattcgttttaaagaacgatttggcgatcaagttgctgtttta
cacagtggcttatcggcaggtgaaaaatacgacgaatggcgtaaaattcaacgagctgaa
gtaaaagtggttgtaggagcacgctccgctatttttgcgcctttccaaaatttagggctt
atcattcttgatgaagaacatgaatcaagttataagcaagatgattctcctcgttatcat
gcccgcgatatggccatatggcggagtgaatatcacaactgtccggttattttaggaagt
gcaacaccttcacttgaatcgtatgcccgcgcacaaaaaggggtttatgagttattagtt
ttagaaaagcgcgcaaaaaatcaaccgttgccagctgttcatattgtcgatatgcgtgag
gaattgcgaaatggcaaccggtcaatgttttcggtgcaattagcagatgcaattcgcgat
cggttagaaaaaaaacaacaaacggtgttgtttttaaacaaacgaggatactcctcgttt
gtattatgccgagattgtggaacagttatgcaatgtccaaattgcgatatttcactcacc
tatcaccggtcgagtgagatgatgaaatgtcattattgtggctatgacgaacgggttcca
acaaagtgcccagaatgcgaaagcgagcatattcgcttttttggaacaggtactcaaaaa
gttgaagaagaattagcaaaagtagtaccagaagcgcgcgttttgcgaatggatgtagac
accacacgtaccaaaggagcacatgagaaaatcctgtctgcgtttggtgaaggcaaagca
gatatattgcttggtacgcaaatgatcgcaaaagggttggattttccaaatatcacgttg
gtgggtgtattgtctgcggataccacacttcatttaccggattttcgagcagcagaaaag
acctatcaattgctaacgcaagttagtggtcgagcaggtcgaggtgtgttaccagggacc
gtgtttgttcaatcatacacacccgagcattatgcgattacgctcgcgaaagatcaatta
tacgagcctttttacgagcaagaaatggccatgcggagagcaagtggttacccgccttat
tattttgttgtgaacatccaatttacacatgaagacttaatgacagtggctgaatatgca
gatcaaaccgtgcgttatttaaaaggtcaattgtcaccaaataccttgataattgggcct
tcagcgtcgttaatctctcgtgtcaataatagatatcgctatcaatgtttgataaaatac
aaaaaagaatctaaactgatcgacacgatgcagcaattgattaaaattcatcgtacagaa
tggctaaaaaaaggagcaacgctgtcgattgatatgaatcctacatcggtcatgtaa
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