Planococcus donghaensis: BCM40_05830
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Entry
BCM40_05830 CDS
T04451
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdg03016
]
BCM40_05830
Enzymes [BR:
pdg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BCM40_05830
Transfer RNA biogenesis [BR:
pdg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BCM40_05830
Prokaryotic type
BCM40_05830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Gp10_D3
Motif
Other DBs
NCBI-ProteinID:
ANU22914
UniProt:
A0A1C7EG08
LinkDB
All DBs
Position
complement(2062166..2063095)
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AA seq
309 aa
AA seq
DB search
MALNGILPLWKEKGMTSHDCVFKLRKILQTKKVGHTGTLDPEVDGVLPICIGNTTKVAEY
ITDQGKTYEAEVTIGYSTETEDATGETVDTDLSEKVITRNQLEAVLLQLTGNIKQIPPMY
SAVKVNGKKLYEYARQGIPVERPERTVRIDSIELMNNDSEWAGQQIKFNIRIRCGKGTYI
RTLAVQIGEALGYPAHMSRLTRTESGKFSQKDCVTLAEVAELAQNGHIGDVLKPLSYGLS
LFPFMEIESKQVFAVKNGQVLERHSILDQMGFVVLTYKGQPVALYKDHPEKADKMKPEKM
FGFPTANEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaacggaattttaccgttatggaaagaaaaaggaatgacatcacacgattgc
gtgtttaagttaagaaagattttgcaaacaaaaaaagtaggacatacaggcactttagat
cctgaagtagacggcgtattgccaatatgtatcgggaacacaacgaaagtagcggagtat
attaccgaccaaggaaagacttatgaagcggaagtgacaattggttattcgactgaaaca
gaagatgcgactggtgaaacagtagatacagatttatcagaaaaagtcatcacccgcaat
caattagaggctgtattgctgcaattaacagggaatattaagcaaattcctcctatgtat
tcggcagttaaagtaaatggtaaaaaattgtacgaatatgcgcgtcaaggaattcctgtt
gagcgaccagagcgaacagtccgaatcgactcaatcgaattgatgaataacgatagcgag
tgggcaggtcaacaaatcaaattcaatattcgcatacgttgcggaaaaggaacttatatt
cgtacactagctgtgcaaattggagaagctctaggttatcctgcacatatgtctagacta
acgcggactgaatcgggaaaatttagccaaaaggattgcgtaacacttgccgaagtagct
gaacttgctcaaaatggacatatcggtgatgttttgaaaccgctaagttatggattgagt
ttatttcctttcatggaaattgagtccaaacaagtttttgctgtgaaaaatggacaagta
ctagaaaggcattctatactcgaccaaatgggatttgttgtgttgacgtataaaggacag
cctgtagcactttataaagatcatcctgaaaaagcggacaagatgaaacctgaaaaaatg
ttcggttttccgacagcaaacgaggtgtag
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