KEGG   Planococcus donghaensis: BCM40_06275
Entry
BCM40_06275       CDS       T04451                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pdg  Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:pdg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdg03032]
    BCM40_06275
   03036 Chromosome and associated proteins [BR:pdg03036]
    BCM40_06275
   03400 DNA repair and recombination proteins [BR:pdg03400]
    BCM40_06275
DNA replication proteins [BR:pdg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BCM40_06275
Chromosome and associated proteins [BR:pdg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BCM40_06275
DNA repair and recombination proteins [BR:pdg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BCM40_06275
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_2 Rpf1_C
Other DBs
NCBI-ProteinID: ANU22998
UniProt: A0A1C7EGU3
LinkDB
Position
complement(1972826..1973098)
AA seq 90 aa
MNKTELVNSVAEAAELSRKDAAKAVDAAFETIQDALTKGEKVQLIGFGNFEVRERAARKG
RNPQTGAEIEIAASKVPAFKPGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattagtgaactctgttgctgaagcagctgaactttctcgtaaagac
gctgccaaagcagttgacgctgcatttgagacgattcaagacgctttaactaagggtgaa
aaagtacagttgatcggattcggtaactttgaagtacgcgaacgcgcggcccgcaaagga
cgtaacccgcaaactggtgctgaaatcgagatcgctgcaagcaaagttcctgcatttaag
ccaggtaaagcgcttaaagacgcagtgaagtaa

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