Planococcus donghaensis: BCM40_08640
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Entry
BCM40_08640 CDS
T04451
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdg03016
]
BCM40_08640
Enzymes [BR:
pdg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BCM40_08640
Transfer RNA biogenesis [BR:
pdg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BCM40_08640
Prokaryotic type
BCM40_08640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ANU23437
UniProt:
A0A1C7EJ96
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All DBs
Position
1517805..1518749
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AA seq
314 aa
AA seq
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MQLLFLGTGAGMPSKQRNTSALVLKLLEERGTVWLFDCGEATQHQILRTTVKPRKIEKIF
ITHMHGDHIFGLPGLLGSRSFQAGEEPLDIYGPVGIKEYIQMTLTLSRTHLTYPIVYHEL
SEGMTFEDELMTVETRLLDHVIPSYGFRITQKPLPPKLLINKALSLGVPKGPLLAKLKTG
QDIELANGQWVRSGDVTEPEQPGFIVTILGDTRFCKTAVELGRGADVLVHEATFDATAKK
MAAEYGHATVYDAAETARLAGANTLIMNHISARFLPEDEKFLLKQMKEQHPRGFIAHDFA
EFEWLQQEKKIRKK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcagttattatttctaggtactggagcgggaatgccttctaaacaacggaacacttcc
gcactggtactgaaattgcttgaagaacggggaaccgtttggttgtttgactgtggcgaa
gcaacacagcatcaaattcttcggactacagtaaaaccgcgcaagattgaaaaaatcttt
attacacatatgcatggtgatcatatttttggcttacccggtttgcttgggtctcgttca
tttcaagcaggtgaagagccgcttgatatttatggacctgtaggcattaaagaatatatc
caaatgacgttaacactcagtcgaactcatttaacgtatccgattgtttaccacgaacta
tctgaaggaatgacatttgaagacgaattgatgacagtggaaacgcgtttattagatcat
gtaatcccctcttacggatttcgcattacacaaaaaccattacctccaaaattactaatc
aacaaagccttgtctcttggagttcctaaaggtccgttattggcaaagctaaaaactgga
caagacatcgagcttgccaatggtcagtgggtgcggagtggtgacgtaacagaacctgaa
caaccgggatttatcgtgacgattttaggcgacacgcgtttttgtaaaaccgcagtagaa
ttaggtcgcggtgcagatgtgttagtacacgaagctacgttcgacgcaactgctaaaaaa
atggcggcagaatatggtcatgcaactgtctatgacgctgctgaaactgctcgattagca
ggagcgaatacgttaatcatgaatcacattagtgctcgctttttacctgaagatgagaag
tttttattaaagcaaatgaaagaacagcatccacgaggatttattgcgcatgattttgca
gaatttgaatggctacaacaagagaaaaaaataaggaaaaaatga
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