Planococcus donghaensis: BCM40_09005
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Entry
BCM40_09005 CDS
T04451
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdg03019
]
BCM40_09005
03009 Ribosome biogenesis [BR:
pdg03009
]
BCM40_09005
Enzymes [BR:
pdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCM40_09005
Messenger RNA biogenesis [BR:
pdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCM40_09005
Ribosome biogenesis [BR:
pdg03009
]
Prokaryotic type
rRNA helicases
BCM40_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ANU23502
UniProt:
A0A1C7EJH8
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All DBs
Position
1444229..1445524
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AA seq
431 aa
AA seq
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MTKFNEYPFKPFLLEAVEKLGFTEPTQIQKEMMPHILKGTSAIGQSHTGTGKTHSFIIPI
VERIDVSKQEVQAVISAPTRELGTQIFNELQKLVVGSGIEVKSFIGGTDKQRSINKLKTQ
PHIVVGTPGRLRDLVKENALLVHTGKILVVDEADLAFDLGFIEEIDQVAGKMKDDLEMYV
FSATIPEKLKPFLKKYMESPIHVKIGDKRPTADGLDFYLVPVRSKKKMDRLQDVMKVINP
YLAIIFVNTRTNADYVADQLAKEGIRVGRVHGDLAPRERVKMMRQIRDLEYQYIVATDLA
ARGIDIQGVSHVINYELPEDLEFFIHRVGRTARAGMKGLAITLFKPEEDDAIVRIEKMGI
PFQQKDIVKGEFVDLKERHSRTTRTRKVNEADAKAKTMVHKPKKVRPMYKKKMKWKMDEI
KKMERRKNRKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttaacgaatacccattcaaaccgtttctattagaagcggtagaaaaactt
ggttttacggaaccaacacagatccaaaaggaaatgatgccccatatattgaaaggcaca
agtgcaattggacaatcccatacagggactggaaaaacgcatagtttcattattcccatt
gtagaacgtattgacgtcagcaaacaggaagtgcaggcggtaatttcagcaccgacacgt
gaacttggaacgcagatcttcaatgagttgcaaaaactagttgttggatcaggcattgaa
gtaaaatcgtttatcggtggtacggacaaacaacgttcgattaacaagttgaaaacacaa
ccccacatcgtcgttggaacccctggtcgattaagagacttagtaaaagaaaacgctttg
ttggttcacacaggtaaaattcttgtagtggatgaagcagatttagctttcgatcttggc
tttatcgaagaaattgaccaagtagctggaaaaatgaaagatgatctagaaatgtatgtc
ttttcagccacaattcctgaaaaactaaaaccattcttgaaaaaatacatggagtcacct
atccatgtgaaaattggcgacaaacgtcctactgcagatggtttagacttttacctagtg
cccgtaagaagcaaaaagaaaatggatcgcttgcaagatgtgatgaaagtaatcaatcct
tatttagcgattattttcgtcaacactcgtacaaatgcggattatgttgcagatcaatta
gcgaaagaaggcattcgtgttggacgtgttcacggcgatttagccccacgtgaacgcgtc
aaaatgatgcgtcaaattcgcgacttggaatatcaatacattgtagcgacagatcttgca
gctcgaggaattgatattcaaggcgttagccatgtcatcaactatgaattgccggaagac
ctggaattctttatccaccgtgtaggccgtacagctcgcgcgggcatgaaaggattagcg
attacgctattcaagccagaagaagacgatgcgattgttcgtattgagaaaatgggcatt
cctttccaacaaaaagatattgtgaaaggcgaatttgtcgacttgaaagagcgtcatagc
cggacaacacgtactagaaaagtgaacgaagcagacgcgaaagcgaaaacaatggttcac
aaaccgaaaaaagtaagaccaatgtacaagaagaagatgaagtggaaaatggacgaaatc
aaaaaaatggaacgacgcaaaaatcgtaaaaaataa
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