Planococcus donghaensis: BCM40_09880
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Entry
BCM40_09880 CDS
T04451
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pdg
Planococcus donghaensis
Pathway
pdg03030
DNA replication
pdg03410
Base excision repair
pdg03420
Nucleotide excision repair
pdg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCM40_09880
03410 Base excision repair
BCM40_09880
03420 Nucleotide excision repair
BCM40_09880
03440 Homologous recombination
BCM40_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdg03032
]
BCM40_09880
03400 DNA repair and recombination proteins [BR:
pdg03400
]
BCM40_09880
Enzymes [BR:
pdg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCM40_09880
DNA replication proteins [BR:
pdg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BCM40_09880
DNA repair and recombination proteins [BR:
pdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BCM40_09880
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCM40_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH
DUF1986
Motif
Other DBs
NCBI-ProteinID:
ANU23668
UniProt:
A0A1C7EIN0
LinkDB
All DBs
Position
1265522..1268158
Genome browser
AA seq
878 aa
AA seq
DB search
MEGVIFVAKKILLLDGNSLAYRAFFALPLLTNEHGIHTNAVYGFTMMLQKILDEEQPTHM
IVAFDAGKTTFRHKTFSEYKGGRQKTPPELSEQFPYLRKLIDAYRIKRYELENYEADDII
GTLSLEAERKGDEVVVISGDKDLTQLASPTTTVYITRKGITDIEKYTVEHIKEKYGLTPL
QIIDMKGLMGDASDNIPGVPGVGEKTALKLLAAHGSVEGVYEAIEQQKGKMKEKLIANED
LAYISKQLATIERQAPINIQIDELSYAGPDQDELVKVWKELAFKSLLEKMEYTAEETVKE
ELKFEVLTTLDPSILKDEMAVHLELYDEHYHSCDLLGVSLATETDTYVIPMDVVEQSAEF
HTWCKDSTKKKFMSDSKAATAAFLRFGVELRGVDFDLMLGAYIVNPSLTYTDMASIVQEY
GHNEVSTNEQIYGKGAKKKIPESSVLHEHIARKARTIWKVRPLIMEKLEENEQFDLYDKL
ELPLATVLGQMESLGVMVNRDQLVEMGKELSHKLEKIESDIHGLAGQEFNINSPKQLGVI
LFEKLGLPPLKKTKTGYSTAADVLEKLEGQHEIISHILMYRQLGKLLSTYIEGLLKEIHE
DGKIHTRFQQALTTTGRLSSINPNLQNIPVRLEEGRKIRKAFVPSEPGWVMVAADYSQIE
LRVLADMSEDERLVQAFKDDRDIHTTTASDVFHVAEEEVTSDMRRAAKAVNFGIVYGISD
YGLSQNLNIPRKEAAAFIERYFASFPGVKSYMTNIVADAKRDGFVTTLMNRRRYLADITS
SNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMDAAIEREGLQARMLLQVHDELIFEAPP
EELDQLMKLVPEVMENAVKLSVPLKVDIAHGSTWYDTK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggtaatttttgtggcaaagaaaatacttttattagatgggaatagtttggcg
tatcgcgcgttttttgctttaccgctattaaccaatgaacatggcattcatacgaatgcc
gtatacggatttaccatgatgctccaaaaaatactcgatgaagaacaacctacgcatatg
attgtggcttttgatgcgggaaaaacaacattccgtcacaaaacatttagcgaatacaaa
ggtggaagacaaaaaacgccgcctgagttatcggagcaatttccttaccttcgcaaatta
atcgatgcttacagaatcaaacgctacgaattggaaaattatgaggcagatgacattatc
ggtactttaagtttagaagctgagcggaaaggtgacgaagtagtcgttatttccggcgat
aaagatttaactcaattagcgtctcctacgacgactgtttatattacgcgcaagggcatt
accgatatcgaaaaatatacagtggaacatattaaagaaaagtatggcttaacgcctctt
caaattattgatatgaaaggcctaatgggcgatgcatctgataatatcccaggggtacca
ggtgttggagagaaaacggcgttaaaattactagcggcacacggttcggtggaaggtgta
tatgaagccattgagcaacaaaaaggcaagatgaaggaaaaactaatcgccaatgaagac
ctagcttatattagtaagcaattagcaaccattgaacgacaagcaccgattaatattcaa
attgatgaattgagttatgctggaccagatcaagatgagttagtgaaagtatggaaagaa
cttgcgtttaaatctttgttagaaaaaatggagtacacggcagaggaaacagtaaaagaa
gaattgaaatttgaagtgctgacaacgcttgatccatctatattaaaagatgaaatggct
gtacatcttgaattatacgatgaacattatcatagctgcgatttactaggtgtgtcactc
gcgactgaaacggatacgtacgttattccgatggatgttgtggagcagtctgcagagttt
catacttggtgtaaagattcgactaagaaaaaattcatgtcagactctaaagcagcgacg
gccgcatttttacgtttcggcgttgagctaaggggcgttgatttcgacttaatgctagga
gcttatattgtcaatccttcgttaacttatacggatatggcaagcattgttcaagaatat
ggtcataatgaggtgtcgacaaatgaacaaatttacggcaaaggtgctaaaaagaaaatt
ccagaaagcagcgttttacatgaacatattgcgagaaaagcacgcacgatttggaaagtc
cgcccactcattatggaaaagcttgaagaaaacgagcaattcgatttatacgataaatta
gaattgccactcgcaacagttttagggcaaatggaatctcttggtgtaatggtaaaccgt
gaccaattagtcgagatgggtaaagagttgtctcataaattagagaaaatcgagtctgat
attcacgggctagcggggcaagaatttaatataaattcaccaaaacaattaggagttatt
ttatttgaaaaattagggttgccacctttaaagaaaacaaagactggctattcgacagca
gcggatgttttagaaaaattagaaggtcaacacgaaattatttctcatattttaatgtat
cgtcaattaggtaaactattgtctacttatattgaaggtttgttaaaagaaattcatgaa
gatggcaaaattcatacccgctttcaacaagcgctcacgacaactgggcgattaagttcg
attaacccaaacttacaaaacattccggttcgtctagaagaaggacgcaaaatccgtaaa
gcttttgtaccctcagaaccaggatgggtcatggtagcagccgattattctcaaattgaa
ttgcgcgtacttgctgatatgtcagaagatgaacgactcgtacaagcctttaaagacgac
cgagacattcacacgaccactgcgagcgatgttttccatgtagctgaagaagaagtaacg
agcgatatgcgccgagcagctaaagcggttaactttggaattgtttatgggattagtgat
tatggcttgtctcaaaacttaaatattccgcgtaaagaagcggcggcttttattgagcgt
tattttgctagcttcccaggcgtgaaaagttatatgacgaacatcgtggcagatgcaaaa
cgtgatggctttgtcacaactttgatgaatcgtcgccggtatttagcagatatcacaagc
tcaaatttcaacttgcgtagctttgcagaacggacggcgatgaatacgccgattcaaggc
agtgcagcggatattattaaaaaagccatgattgatatggatgcagcgatagaacgtgaa
ggattacaagcacgcatgcttttacaagttcacgatgaattgatttttgaagcaccccct
gaagaattagatcaactgatgaaattagtacctgaagttatggaaaatgctgtgaagtta
agtgttccattaaaagtggacattgctcacggttccacttggtacgatactaaatga
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