Planococcus donghaensis: BCM40_11260
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Entry
BCM40_11260 CDS
T04451
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdg03019
]
BCM40_11260
Messenger RNA biogenesis [BR:
pdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BCM40_11260
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
REPA_OB_2
Motif
Other DBs
NCBI-ProteinID:
ANU23911
UniProt:
A0A1C7EJV3
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Position
1004886..1005824
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AA seq
312 aa
AA seq
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MTKGITQYAVGETVDVFLLIKQSVKGVTTTGNPFISLVLQDKSGDIEAKLWDTKDEQEKM
FAAEVIVRVGGEIHNYRGKNQLRIKSIRPAKPEENQSISDLMPSSEKSADELLEEVMKYL
FEMENPQIQRITRFMLKKYQQQFLTYPAATRNHHDYVSGLADHVVSMLKLGKSLTEIYPG
LNKDLLFAGIILHDIGKVIELSGPIATTYTVEGNLIGHISIMVTEVAKAAEELEIEGEEV
MLLQHIILSHHGKEEWGSPKKPMLKEAEMLHYIDNIDAKMMMLDRVLGKTKEGEFSERVF
ALDNRSFYKPKI
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagggaattacacagtacgcagtcggagaaacagtcgatgtattcttactgatc
aagcaatcagttaaaggagtcacgactactggaaatccatttatttcgctcgtgttacaa
gataagagcggagatattgaagcgaaattatgggacacaaaagatgaacaggaaaaaatg
ttcgcagctgaagtaattgttcgcgttggtggagaaatccataattaccgtggaaaaaac
caattacgcattaaaagcattcgcccagcgaaaccagaagaaaatcaatcaatctctgat
ttaatgccttcttctgaaaaatcagcagatgaattactcgaagaagtgatgaaatatttg
ttcgaaatggaaaaccctcaaatccaacgaatcacgcgttttatgctgaaaaaataccag
cagcaatttttaacatatccagcagcaacacgtaatcatcatgattatgtttcgggatta
gcagatcatgttgtatcgatgttgaaattaggaaagtctttaacagagatttaccctgga
ctgaacaaagatttgttatttgcaggaatcatcttacatgatattggtaaagtcatcgag
ttatctggacctatcgcgaccacttatacagtagaaggtaatttaatcggtcatatatca
atcatggtaaccgaagttgcgaaagctgcagaagagctagagattgagggagaagaagtc
atgctcttacagcatattatcctgtcacatcatggcaaagaagagtggggaagcccgaaa
aaaccaatgctcaaagaagccgaaatgcttcattatattgacaacatcgatgcgaaaatg
atgatgttggatcgagtacttggcaagactaaagaaggcgagttttctgagcgagttttt
gcgctagacaatcgttcgttttacaaaccgaaaatttaa
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