Planococcus donghaensis: BCM40_11835
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Entry
BCM40_11835 CDS
T04451
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdg03009
]
BCM40_11835
Enzymes [BR:
pdg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BCM40_11835
Ribosome biogenesis [BR:
pdg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BCM40_11835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
MTS
PrmA
Methyltransf_15
Cons_hypoth95
Methyltransf_11
RrnaAD
TPMT
Motif
Other DBs
NCBI-ProteinID:
ANU24000
UniProt:
A0A1C7EJF0
LinkDB
All DBs
Position
898483..899844
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AA seq
453 aa
AA seq
DB search
MKPVNKNDRISVHVEDLTHDGAGVAKVDGYPLFVPGALPGEDVVVHVLKTLKSYGFAKLI
EIQQASPFRVTAPCPVFDTCGGCQIQHLSYEGQMTFKQKLVRDAITRIGKLPDVPVHPVK
GMEDPWRYRNKSQIPFGMQDGKVVAGFYQPRSHDIADTNTCLIQTPEADAIMVALKKNLI
DMGIEPYEEATHRGMLRHVVVRKARATGEIMVVLVTKKKKFPQAQRAIELIQATVPEVTS
IVQNINSEKTNVIFGDETLTLWGKDVIEDRIGDVRFEISARSFYQINPVQTEVLYGQALA
YAQLTGEETVIDAYCGIGTISLFLAQRAKFVMGVEIVPQAIEDAKRNAELNGLTNTLFEA
GPAEQVIPRWYKEGKKADVLVVDPPRKGCDEQLLHTILKQRPTRVVYVSCNPATLARDLR
ILEDGGYRTKEVQPVDMFPQSTHCEAVAWLELV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccagtaaataaaaatgaccgaatttcggttcatgtagaagatttgacgcacgac
ggagcgggtgtcgcaaaagttgacggctatccattatttgtaccaggcgcattgcctgga
gaagatgttgtggttcatgtgttaaaaacgttaaaatcatatggctttgcaaagcttatt
gaaatacaacaagcttcaccttttcgtgttacagctccttgtcctgtatttgatacatgt
ggaggctgtcagattcaacacttgtcttacgaagggcaaatgacttttaaacagaaattg
gtacgcgatgcgattacccgtattggtaaattaccagacgtaccggtgcatccggtgaaa
ggaatggaagatccatggcgttaccgcaataaatcgcaaattccttttggcatgcaagac
ggcaaagtggttgctggattttaccagccacgttcgcatgatattgcagacaccaatacg
tgtttaatccaaacccctgaagcagacgcgattatggtcgcgttgaaaaagaatttgatc
gacatgggcattgaaccttatgaagaagcgacacatcgtggcatgctgcgtcatgtggtg
gttcgtaaggcaagagcaaccggagaaattatggtcgtgttagtgacgaagaaaaagaaa
ttcccacaagcgcaacgtgcgattgagttgatccaggctactgttccagaagtgacatcg
attgtccaaaacataaattctgaaaagactaatgttattttcggtgatgaaacattaacg
ctatggggcaaagatgtgattgaagatcgaattggggatgttcgtttcgaaatttcagca
cggtcgttttatcagattaaccctgtacaaacagaagtgctttatggccaagcgctagca
tatgctcaattaacaggtgaagaaactgtcatcgatgcgtattgtggcattggaaccatt
tcgttattccttgcgcaacgagcgaaatttgttatgggtgttgaaattgtgccgcaagca
attgaagatgctaaacgcaacgctgagttaaatggcttaacaaatacattgtttgaagca
ggacctgctgaacaagtgattccgcgttggtataaagaaggaaagaaagcagatgtatta
gttgtcgatccaccacgtaaagggtgtgatgagcagttgttgcacaccatattaaaacaa
cgcccaacacgcgttgtgtatgtatcctgcaacccagcaacactcgcacgggatttgcgt
atacttgaagatggtggctatcgtacgaaagaagtacaacctgttgatatgttcccgcag
tctacacattgtgaagctgtggcatggttagaattagtttaa
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