Planococcus donghaensis: BCM40_11890
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Entry
BCM40_11890 CDS
T04451
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdg
Planococcus donghaensis
Pathway
pdg03420
Nucleotide excision repair
pdg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCM40_11890
03430 Mismatch repair
BCM40_11890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdg03400
]
BCM40_11890
Enzymes [BR:
pdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCM40_11890
DNA repair and recombination proteins [BR:
pdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCM40_11890
MMR (mismatch excision repair)
Other MMR factors
BCM40_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
FWWh
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ANU24011
UniProt:
A0A1C7EK52
LinkDB
All DBs
Position
884108..886321
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AA seq
737 aa
AA seq
DB search
MELISKNLLNGMNPEQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVLEKQVYPSNIL
AITFTNKAAREMRNRIDGLLGHGTGQRMWASTFHSMCVRILRRDIDKLGMSKNFSILDTT
DQLTVIKNVLKQQNLDPKKYEPRTMLNAISSSKNECIDAAQFAADMNQFNPYEKTVSDVY
TAYENRLKKNQSLDFDDLIMTTLNLFNTVPEVLEYYQNKFHYIHVDEYQDTNNAQYQLVQ
KLASKFKNICVVGDSDQSIYRWRGADITNILSFEKDYPNAKVIMLEQNYRSTKRILQAAN
DVIQKNTSRYPKELRTENDEGTAITLHKAGDERQEAQFVVQTIQKLMDEENYKTSDFAIL
YRTNAQSRIMEEMFVKSNMSYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARVINE
PKRGIGATSFEKMARFAIEQDRTIMDALQEADFMGLTPKTAQTALEFQKMINSFTQMQEY
LSVTELVEEVLKKSGYRQMLQNDKTIEGESRLENLDEFLSVTKAFEKQSDDKSLVAFLTD
LALISDIDSLDDEEDADGPIILMTMHAAKGLEFPVVFIIGLEENVFPHSRSNNDDEELEE
ERRLAYVGITRAEQRLYLTHASSRTLFGKSNFNMPSRFISEISEDLIEQTRAHHRAGATT
SYRQVPKRPAVTRPSYNQSGSEKLGWKTGDKATHKKWGTGTVVSVKGEGEQTELDIAFPS
PVGIKRLLAKFAPIEKE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggaattgatatcaaaaaacttattaaacgggatgaacccggaacaagcagaagcagtc
aaaacgactgaaggaccgctacttattatggcaggtgcaggatcagggaaaacgcgtgtg
ctgacacaccgtatagcttatttggtgctggaaaaacaagtttacccatccaatatttta
gccattacgtttaccaataaagccgcacgtgaaatgcgtaaccggattgacggattatta
gggcacggaaccgggcagcgtatgtgggcatctacatttcactcaatgtgtgtgcgtatt
ttaagacgggatattgacaaattaggcatgtcgaaaaacttctcgattttggatacaacc
gatcaattaacggttattaaaaatgtcttaaaacaacaaaacttggatccaaaaaaatac
gaaccaagaacaatgttaaatgccatctcctcgtctaaaaacgaatgcattgatgccgct
caatttgcagcagatatgaaccaatttaacccatacgagaaaacagtctcggacgtttat
acagcttatgagaaccgtttgaagaaaaaccagtcactggattttgatgatttgattatg
accacgttgaatttatttaacacggttcctgaagtactagagtattatcaaaacaaattt
cactacattcacgtagatgaatatcaagatacgaataatgcacaatatcaattggttcag
aaattggcgagcaagtttaaaaatatttgcgtagttggtgattcagatcagtcgatttat
cgctggcgtggggcggatattacaaatatcctatcgttcgagaaagattatccaaatgcg
aaagtcatcatgctcgagcaaaattatcgttcgacaaaacgtatattacaagcagcgaac
gatgtaattcagaaaaacacgagtcgttatccaaaagaattgcgtacggaaaacgatgaa
ggtacagccattactttgcataaagcaggagatgaacgtcaagaagcacagtttgtggtt
caaaccattcaaaagctaatggatgaagaaaactacaaaacgtctgattttgcgattctt
taccggacaaatgcacagtcacgaattatggaggaaatgttcgttaaatcgaatatgtct
tacaccattgtcggtggaacaaaattctatgaccgtaaagaaataaaagacttgttagcg
tatttacgtttgattgccaataatgacgatgatttatcgttagctcgtgtcattaacgaa
ccaaagcgtggaattggcgcaacatctttcgagaaaatggcacgttttgcgattgaacaa
gatcggacaattatggatgcgttacaagaagctgattttatgggattaacgccaaaaacc
gcacaaacagctttagagttccaaaaaatgattaatagttttacgcaaatgcaggaatat
ttgtctgttactgaattggttgaagaagtactgaaaaagtcaggttatcgtcaaatgttg
caaaacgataaaaccattgagggcgaaagccgtttagaaaacttagatgaattcttatca
gtcacaaaagcttttgaaaaacaaagcgatgataaatcgttagtggcattcttaaccgat
ttggcattgatttcagatattgattccttagatgacgaagaagatgcagatggcccaatt
attttaatgacgatgcacgcagcaaaaggattagaatttcctgttgtctttattattggg
ttagaagaaaacgtctttccgcattcacggtcaaacaatgacgatgaggaattggaagaa
gagcgcagactcgcttatgttggaattacgcgagcagaacagcggctgtatttaacacat
gcgtcttctcgtacattgttcgggaaaagtaattttaatatgccttctcggtttatttcg
gagatatcagaagatctgattgaacaaacacgcgctcatcatcgtgctggggctactacc
agttatcgacaagtaccaaaacgtccagccgtaacacgtcctagctataatcagtcaggc
agtgagaaattaggttggaaaacgggcgacaaagcaacgcataaaaagtggggtactgga
acggtcgttagtgttaaaggcgaaggcgaacaaacggaactcgatattgcgttcccaagc
cctgtcggcattaaacgcttattggctaaatttgcgccgattgaaaaagaatga
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