Planococcus donghaensis: BCM40_13505
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Entry
BCM40_13505 CDS
T04451
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdg03021
]
BCM40_13505
Transcription machinery [BR:
pdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCM40_13505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_37
HTH_23
DUF1492
DUF134
GerE
HNF-1_N
HTH_3
Sigma70_ECF
KORA
Packaging_FI
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU24299
UniProt:
A0A1C7EKF2
LinkDB
All DBs
Position
520805..521587
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AA seq
260 aa
AA seq
DB search
MSKQSHPNQPTKEQVLDWIEAYQKTEDEEAQTNLVLNYKRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIRRYDPSYGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKA
TVEVLTTELQRSPQVWEIAEYLDVEEDDILEAMEMGKSYQALSMDHSLEADSDGSTITLF
DVVGQEDDGYEKADQRMLVAEAMNVLSEREKQIIQFTYIEQLSQKEAGDKLGISQMHVSR
LQRKAIKKLQEAILAAGGVS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacagtctcatcctaatcagcctactaaagagcaggtgcttgattggattgaa
gcttatcaaaaaacagaagatgaagaagcccaaacaaacttggtattaaattataaacgc
cttgtggaatccattgctcgaaaatattctaatggcaaatcttatcacgaagatattgcg
caagtagggatgcttgggcttttaggtgctattagacgttatgatccttcatacggtcgt
agctttgaagcctttgctgtgccaacaattatcggtgaaattaaacgattcttgcgtgat
aaaacatgggcaattcatgtcccacgtcgtataaaagaattgggtccgcggataaaagcg
acagttgaagtgttaactacagaacttcaacgttcaccgcaagtgtgggaaatcgctgaa
tatctggatgtggaagaagacgatatattagaagcaatggagatgggcaagagctatcaa
gcactttcaatggaccattctttagaggcggattcagatggtagcacaatcactttattt
gatgtagttggccaagaagacgatggttatgagaaagcggatcagcggatgcttgtagct
gaagcgatgaatgtgctttctgaacgggaaaagcagatcatccaattcacctacatagag
cagttgagccaaaaagaagctggggataaactcggcatttctcaaatgcatgtttcccgt
ttgcaaagaaaagcgattaagaaacttcaagaagcaatattagctgctggcggagtatcc
tag
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integrated database retrieval system
