Paenibacillus donghaensis: B9T62_08310
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Entry
B9T62_08310 CDS
T04971
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh03420
Nucleotide excision repair
pdh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B9T62_08310
03430 Mismatch repair
B9T62_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdh03400
]
B9T62_08310
Enzymes [BR:
pdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B9T62_08310
DNA repair and recombination proteins [BR:
pdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B9T62_08310
MMR (mismatch excision repair)
Other MMR factors
B9T62_08310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PhoH
UvrD_C_2
AAA_19
SLFN-g3_helicase
AAA_30
Viral_helicase1
AAA_16
DEAD
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
ASA20786
UniProt:
A0A2Z2K4K6
LinkDB
All DBs
Position
complement(1980977..1983316)
Genome browser
AA seq
779 aa
AA seq
DB search
MSAEFESRDEEQKRVDEVVGEIDKQAADLAGELGQKKTDIVEFRKNFWEEVSLNFEDAGT
YASLKQQTEILSENERTYQLSQKKLHTLTRLKQSPYFGRIDFRDGDARQPEVIYLGIASL
LAANGLDFLVYDWRAPVSNLYYDYSPGPARYDTPSGVIEGDMTLKRQYVIRNGRIESMFD
ASLTIGDELLQEVLGQQANSQMRSIVATIQKEQNLIIRDVTSQLLIVQGAAGSGKTSAAL
QRAAYLLYRFREHLRADQIVLFSPNHMFNSYVATVLPELGEDNMAQTTFQEYLAHRIGSL
FQLEDPFQQMEYILSGMSESDYAQRIEGIQWKASKEFMLFLEHYVDYLGHEGMLFQDIIF
RDEILLSAQTIEDQFYTYASSLRLPNRLGLLSEWLLKELKKQAIQEREKPWVEDEMELLD
REEYNWAYQELQKQERLADPAFSDSRSERDILAARIVDVHFRPLQQDIQQFAYVDIPGIY
LQLFASLENLPIFNEGLGLPQHWQAICKHTVGPLDQAKLLYEDATPFLYLTECIEGFQTN
NTIRHVFIDEAQDFSTFQFMFIKRLFPRSRMTVLGDWNQRIFIHDQASEDTELLQSLYGD
DNTQSVRLTRSYRSTQPIIEFTRASIPGGQTIEAFDRQGNKPTVKQVRSTDGLIAQVLSS
ILELQNKGHRTIAIICKTANESIEAHRALQAKLPIRLVEKETAAFAAGIIVIPAYLAKGI
EFDAVVIYDASQHKYGQESERKLFYTACTRAMHDLHVCLNGDFNPFLSDVPPHLYHLIQ
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaatttgagagccgggatgaggaacaaaagcgtgtggatgaagtggtcggc
gaaattgacaagcaagcggcagaccttgcaggtgaactgggccagaaaaaaacggatatc
gtagaattccgtaaaaatttctgggaagaggtctctttgaatttcgaagatgcgggcact
tatgccagtttgaagcagcagaccgagattttatccgagaatgagcgaacctatcagctg
agccagaagaaattgcatacactaacacggctgaaacagtcgccctatttcggtcgcatc
gatttccgggatggcgatgcccggcagccagaggtcatttatttagggattgcttccttg
ctcgccgctaatggccttgattttcttgtatacgattggcgagctccagtctccaacctc
tattatgactattctccgggtcctgccagatacgatacccccagcggagtgatcgaagga
gacatgaccttaaaaagacagtacgttattcgcaacgggagaatcgaaagcatgttcgat
gccagcctcactatcggggatgaattgctgcaggaggtgctgggacaacaagccaattca
cagatgcgcagcatcgtagccacgatccaaaaagaacaaaatctgattatccgcgatgtt
accagccaactgcttatcgttcaaggtgcagccggcagcggcaaaacgtcggcagcccta
caacgggccgcttatctgttataccgtttccgtgagcatctgcgtgcagaccagatcgtg
ctgttctcgcctaaccacatgtttaacagctatgtggctacggttctgccggagctaggt
gaagacaatatggctcagaccactttccaggaatatttggcgcaccgcatcggtagcctt
tttcaactggaggacccgttccagcaaatggagtatattctttcgggaatgagcgagagc
gattatgctcaacgcatcgaagggattcagtggaaagcctccaaggaattcatgcttttc
cttgaacactatgtagattatttgggacacgagggtatgcttttccaagacatcattttc
cgcgatgaaatcctgctgtcagcccaaacaatcgaagaccagttctatacctacgcctcc
agtctgcggctgcccaaccgtctggggctgctgtccgagtggctgctgaaggagttgaag
aaacaggccattcaggaaagagaaaagccttgggttgaagatgaaatggaactgctggac
agagaggaatataactgggcctatcaggagctgcagaaacaggaacgccttgcagaccct
gccttctccgattccaggagcgagcgggatattctggctgccagaatcgtagatgtccat
ttcaggcctctgcagcaggacatccagcaattcgcatacgtggatattcccggaatttac
cttcagctgtttgcttctcttgagaacttaccgatctttaatgaaggtttgggattacct
caacattggcaggccatttgtaaacatacggtaggcccattggatcaagccaagcttttg
tatgaggatgccacacccttcttgtatcttaccgaatgtatcgagggattccagaccaac
aatacgatccggcatgtgtttattgatgaggcccaggacttctccacctttcagtttatg
ttcatcaagcgattgtttccccggagccgaatgaccgtgctgggagactggaaccaacga
atcttcattcatgaccaggcgagcgaagacacagaactgctgcaatctctatatggagac
gataatacacaatccgtaagactaacacgcagctaccgctcgacacagccgatcattgaa
ttcacgcgggcaagcattccgggcgggcagacgattgaagcttttgaccgccaaggcaac
aaaccgaccgtcaagcaggtccggagtaccgatggacttattgcccaagtgctgagcagt
atacttgagctacagaataaaggccaccgaaccattgccatcatttgcaaaaccgccaat
gagagcatagaagctcaccgcgctctacaagccaagctccctattcggctggttgaaaaa
gaaacggctgcttttgcagcaggtataatcgtaattcctgcttatctggcgaaggggatt
gagtttgatgcggtggttatatacgatgcctcgcagcataagtatggccaagagagcgag
cgaaagttattttacacggcctgcacaagagccatgcatgatctgcatgtgtgtttaaac
ggcgatttcaacccgtttctgtcagatgttccgccgcatctgtatcatctgatacagtga
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