KEGG   Paenibacillus donghaensis: B9T62_14785
Entry
B9T62_14785       CDS       T04971                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pdh  Paenibacillus donghaensis
Pathway
pdh02024  Quorum sensing
pdh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B9T62_14785
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B9T62_14785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdh03019]
    B9T62_14785
   03036 Chromosome and associated proteins [BR:pdh03036]
    B9T62_14785
Messenger RNA biogenesis [BR:pdh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     B9T62_14785
Chromosome and associated proteins [BR:pdh03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    B9T62_14785
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ASA21930
UniProt: A0A2Z2KFN8
LinkDB
Position
complement(3378346..3378588)
AA seq 80 aa
MNKSINIQDTFLNQLRKENIPATVYLTNGFQIRGIIKAFDNFTIVIDSDGRQQMVYKHAI
STFTPQRSVSLMQDNGGSEE
NT seq 243 nt   +upstreamnt  +downstreamnt
atgaacaagtccattaacatccaagatacgttcttgaaccaactgcgcaaagagaatatc
cctgctacagtatatttgaccaacggctttcagatccgggggattattaaagcgtttgac
aatttcaccatcgtcattgacagtgacggacgccagcagatggtgtacaagcatgcgatt
tccaccttcactccgcagcgcagtgtatcactgatgcaggataacggcggaagcgaagaa
taa

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