Paenibacillus donghaensis: B9T62_14785
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Entry
B9T62_14785 CDS
T04971
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh02024
Quorum sensing
pdh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9T62_14785
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B9T62_14785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdh03019
]
B9T62_14785
03036 Chromosome and associated proteins [BR:
pdh03036
]
B9T62_14785
Messenger RNA biogenesis [BR:
pdh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
B9T62_14785
Chromosome and associated proteins [BR:
pdh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
B9T62_14785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ASA21930
UniProt:
A0A2Z2KFN8
LinkDB
All DBs
Position
complement(3378346..3378588)
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AA seq
80 aa
AA seq
DB search
MNKSINIQDTFLNQLRKENIPATVYLTNGFQIRGIIKAFDNFTIVIDSDGRQQMVYKHAI
STFTPQRSVSLMQDNGGSEE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtccattaacatccaagatacgttcttgaaccaactgcgcaaagagaatatc
cctgctacagtatatttgaccaacggctttcagatccgggggattattaaagcgtttgac
aatttcaccatcgtcattgacagtgacggacgccagcagatggtgtacaagcatgcgatt
tccaccttcactccgcagcgcagtgtatcactgatgcaggataacggcggaagcgaagaa
taa
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