Paenibacillus donghaensis: B9T62_16345
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Entry
B9T62_16345 CDS
T04971
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9T62_16345 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdh03019
]
B9T62_16345 (pnp)
03016 Transfer RNA biogenesis [BR:
pdh03016
]
B9T62_16345 (pnp)
Enzymes [BR:
pdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B9T62_16345 (pnp)
Messenger RNA biogenesis [BR:
pdh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B9T62_16345 (pnp)
Transfer RNA biogenesis [BR:
pdh03016
]
Prokaryotic type
tRNA degradation factors
B9T62_16345 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
KH_N4BP1_2nd
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ASA22214
UniProt:
A0A2Z2K9N0
LinkDB
All DBs
Position
complement(3649314..3651413)
Genome browser
AA seq
699 aa
AA seq
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MEQRVEMQLGGRRLVLETGRLAKQANAAVMVRYGDTAVLCTVTASKEPKDLDFFPLTVNY
EERLYSVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNMVMSVDQD
CAPEIAAMIGTSAALSISDVPFNGPIGGVEVGLINGEFIINPDIAQQAVSEIHVVVAGTK
DAIMMVEAEANEVTEEVMLEAIMFGHDEVRKIVATIEELVKLAGKEKMAVKLHAVDAEVN
QEVRGYASTRLIDAVKIAEKHARQEAIDLVNDEAVAYFAEKYIEAPELLKDVKEVLHDIV
KEEVRRLITHDKIRPDGRKLDEIRPIECDTNLLPRTHGSGLFTRGQTQILSVCTLGALGD
VQILDGIDLAETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF
PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI
QGMEDHLGDMDFKVAGTAAGVTAIQMDIKINGIDREILQEALQQAKEGRMFILGKMLEVI
SEPRPNLSKYAPKIIIININPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIGSSN
EEMIQKARSIIEGIVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK
VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVLTSETAKA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacgtgtggaaatgcagctcggcggaagacgcctggtgctggaaaccggccgt
ttggccaagcaggccaatgcagctgttatggtgcgttatggagatactgcagtattgtgt
acggttacagcctcgaaagagccgaaggacctggactttttcccgctgactgtcaattat
gaagagagattgtattcggtgggcaaaatccccggcggattcattaaacgtgaaggcaga
cccagtgagaaggcgattctgtccagccgcttgactgaccgtccaattcgtcctttgttc
ccggaaggtttccgtaatgatgtacaggtgttgaatatggtaatgagtgtggatcaagac
tgcgcacctgaaattgccgcgatgatcggtacctccgctgcactgagcatttcggatgtt
cctttcaacggaccgatcggcggagttgaagtaggcctgatcaatggcgagtttatcatc
aaccctgatattgcccagcaggctgtcagcgaaattcatgtcgtagttgccggaacgaaa
gacgccattatgatggtggaagcggaagccaatgaagtgacggaagaagttatgctcgaa
gccattatgttcggacatgatgaggtccgcaagattgttgctaccattgaagaactggtg
aagcttgccggcaaggagaagatggcagtcaagttgcatgctgttgatgctgaggtgaac
caggaggttcgcggctatgcttcgacccgtctgatcgacgcagtgaaaattgccgagaaa
catgcccgtcaggaagccattgaccttgtgaatgatgaggcggttgcgtatttcgcagag
aaatacatagaagcccctgaactgcttaaggatgtcaaggaagtcctgcatgatatcgtg
aaggaagaagtcagacgtctgatcacccacgataagattcgtccggatggccgcaagctt
gatgagattcgtccgattgaatgtgacactaacctgctgccgcgcacgcacggctccggt
ctgttcacacgcggacaaacacagatcctcagcgtatgtacgctaggcgctcttggagat
gttcagattctggacggtattgatctggctgaaaccaaacgtttcatgcaccattacaac
ttccctccattcagcgtaggggaagcgcgtccgttaagagcaccgggacgtcgcgagatc
ggccacggagcactcggagaacgcgcattgtccaaagtcattcctagcgaaactgaattc
ccgtacacgatccgcctcgtatccgaagccatcgaatccaacggttcgacctcgcaggcc
agcatctgcgccagtatcctggccatgatggatgcgggtgtgccaatcaaagcgccggtt
gccggtgtggcgatgggtctgatcaaggacggcgagcatgtatcgatcctgaccgatatc
caggggatggaagatcacctcggcgatatggactttaaggtagcaggtacagcggcaggg
gttactgcgatccagatggatatcaagatcaacggtattgaccgtgagattctgcaggaa
gcgctgcagcaggccaaggaaggacggatgttcattctgggtaaaatgctggaagtgatc
tccgagcctagaccgaacctgtccaaatatgctcccaaaatcatcatcatcaatatcaat
ccggataaaatccgtgatgttattggtgctggtggtaaaattatcaataaaatcatcgaa
gaaaccggcgtaaagatcgacatcgagcaggacggccgtgtgttcatcggttcttccaac
gaagaaatgatccaaaaagcccgttcgattatcgaaggcattgtgcgtgaggtgcaggtc
ggcgaaatttacgtgggtaccgtgcggcggattgagaagtttggcgcatttgtcgagctg
attcccggcaaagacggattggtgcacatctcccagctgtccactgaacgtgtagccaag
gttgaggatgttgtggcaatcggcgataccatcaccgtcaaggttactgaaatcgaccag
cagggtcgtgtcaacctgtcccgcaaggcggtattaacttccgaaacagcgaaggcttaa
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