Paenibacillus donghaensis: B9T62_16360
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Entry
B9T62_16360 CDS
T04971
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdh
Paenibacillus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdh03016
]
B9T62_16360 (truB)
Enzymes [BR:
pdh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B9T62_16360 (truB)
Transfer RNA biogenesis [BR:
pdh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B9T62_16360 (truB)
Prokaryotic type
B9T62_16360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASA22217
UniProt:
A0A2Z2K9U3
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All DBs
Position
complement(3653053..3653967)
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AA seq
304 aa
AA seq
DB search
MSELTGVLAVYKPAGFTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGKATRVVE
YIQELPKEYVATLRLGMSSDTEDMTGTITEALEEVQVSREEVQAVLNSFQGVISQVPPMY
SAVKVDGKRLYELAREGKTVERKSREVEIYEIEMTDMVWEGPYPEISFRVLCSKGTYIRT
LCVDIGRALGLPGVMVKLERTMSAGISASHCLTLEQIAEHMTAGTLEAQLIPADEAIAHL
PKHTVSEEKKKAALQGQRLSLRYVAPEVKQSGHFRLYDLQDVFLGIYELDESGAIAPVKV
FSGA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagctaacaggagttctggctgtctacaagccggcagggttcacttcacatgat
gttgtggccaaagccagacgcattcttggcatgaagcggatcggccacaccgggacgctg
gacccgcaggtgaccggtgtgctgccgttatgcttgggtaaagccacccgagtggtagaa
tatattcaggagctgcccaaggaatatgtggcaaccctgagactgggtatgtcaagcgat
actgaggatatgaccggtacaattaccgaagctttggaagaggtgcaggttagccgtgaa
gaggtgcaggctgtactgaattccttccagggagtgatctcccaggtcccaccgatgtat
tccgcagtcaaggttgacggcaaacgcctgtatgaactggcccgcgagggcaagacggtc
gaacgcaaaagccgcgaggtggagatttacgagattgaaatgacggacatggtctgggaa
ggaccttaccctgagatatcgttccgtgtgttatgctccaaaggcacctatattcgtacg
ctttgtgtcgacatcggccgtgccctggggctgccgggtgtgatggtgaagcttgagcgg
acgatgtcggccggtatttcggccagccattgcctgacgctggagcagattgccgagcat
atgacagcaggaacactggaggctcagctgattcccgccgatgaagccattgcgcatctg
ccgaagcatactgttagtgaggagaagaagaaggcggccctgcagggccagcgtctttcc
ttgcgttatgtagcgccggaagtgaagcaatcgggacatttcaggctatatgatctccag
gacgtatttctgggaatctatgagctggatgaatcaggtgcgattgctccggtcaaggtt
ttttccggggcctga
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