KEGG   Paenibacillus donghaensis: B9T62_20470
Entry
B9T62_20470       CDS       T04971                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pdh  Paenibacillus donghaensis
Pathway
pdh00740  Riboflavin metabolism
pdh01100  Metabolic pathways
pdh01110  Biosynthesis of secondary metabolites
pdh01240  Biosynthesis of cofactors
pdh02024  Quorum sensing
Module
pdh_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pdh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    B9T62_20470 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B9T62_20470 (ribD)
Enzymes [BR:pdh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     B9T62_20470 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     B9T62_20470 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ASA22971
UniProt: A0A2Z2KRD5
LinkDB
Position
complement(4410697..4411812)
AA seq 371 aa
MDTMNDEFYMSLALDMAQRAQGQTGINPVVGCVVVKDGVMIGLGTHLQRGGGHAEVHALN
MAAGQAQGSTAYVTLEPCSHYGKTPPCSQRLIDEGVTRVVVACEDPNPQVAGRGVAMLRE
QGIEVEVGLLRSRALRLNERFIKYILTKQPFVTLKTASTLDGKIATRTGDSKWISNAEAR
KIVHTLRHRHQGIMVGVNTVLADNPTLTTRMDVPGLNPLRIVVDSTLRIPLDAKVVSDGG
APTVVLTTEAADKVKASALAAAGVQVIACGPGPRVDLHKAMTALGEQEISSILLEGGGTL
NGAMLESGLVDRVILFYAPKIVGGTAGTITFPGVERMRDAITLEGLEVEVLGDNVCISGT
PARKYPEDDVN
NT seq 1116 nt   +upstreamnt  +downstreamnt
gtggatacgatgaatgatgagttctatatgtcgcttgcgctggacatggcgcagcgggca
caaggacagaccgggatcaatccggttgtaggttgtgtggtggtgaaggatggcgtaatg
attggccttggcacgcatctgcagcgcggcggcggccacgccgaggtccatgcgctgaat
atggcggcaggacaggcacagggcagcacagcttatgtaacactggagccgtgcagccat
tatggcaagacgccgccgtgcagccagcggctgatcgacgaaggcgttacccgggtggta
gttgcctgtgaagaccccaatccgcaggtggccggacggggcgtagcgatgttgcgtgag
cagggcattgaggtggaagtggggctgctgcgcagccgtgccctgcggctgaatgagcgg
ttcatcaagtatattttgaccaagcagccttttgttaccctgaagactgccagcacactg
gatggcaagattgcgacccgtaccggcgacagcaagtggatctccaacgcagaggcgcgg
aagattgtacataccctgcggcaccgccatcagggcattatggtcggggtgaatacggtg
cttgccgacaatccgacgcttaccacaagaatggatgtgcccggcttgaatccgctgcgt
attgtagtcgattctactctgcgtatcccgctggacgccaaggtggtcagcgatggggga
gcgcctacggttgtgctgactacggaggcagccgacaaggtcaaagcgtccgccttggcc
gctgccggagtccaggtcatcgcatgcgggccaggcccgcgcgttgacctgcacaaggcg
atgacagcgcttggcgagcaggagatcagctcgattctgctggaaggcggaggcacgctc
aatggcgcgatgctggagagcggcctcgtggaccgcgtgatcctgttctatgccccgaag
attgtaggtggaactgccgggacaattacgttcccgggtgtagaacggatgagggatgcc
attacgctggagggattggaagtggaggtgctcggggataatgtctgtatcagcgggacc
ccggcccggaaatatcccgaagatgatgtgaattag

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