KEGG   Paenibacillus donghaensis: B9T62_27415
Entry
B9T62_27415       CDS       T04971                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03090  RNA polymerase sigma-B factor
Organism
pdh  Paenibacillus donghaensis
Brite
KEGG Orthology (KO) [BR:pdh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdh03021]
    B9T62_27415
Transcription machinery [BR:pdh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B9T62_27415
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r4_2 Sigma70_r2 HTH_23 GerE Sigma70_ECF HTH_50 HTH_38 HTH_Tnp_ISL3 HTH_28 KORA TnsD DUF1492 Cyclophil_like2 HTH_24 MarR HTH_29 MarR_2 HTH_10 HTH_31 Phage_antitermQ HTH_3 DUF7343
Other DBs
NCBI-ProteinID: ASA24169
UniProt: A0A2Z2KNI2
LinkDB
Position
complement(6015465..6016235)
AA seq 256 aa
MNEKVTPPESMNEAVSLIWEYQQTKDNDIATVLIRKYEPMVKMASGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISMGIPFEPYAMKSMIGHMKNYLRDKSWYIQVPRRIKEKGALVQQ
AIDELTIKLERSPAVDEIAHYLDLSVEETVEVLAGRECYHYVSLDSPLSQEESGATLGEL
ISSDANDYESLEKRMDLQQALGQLKEQEQQVLLLAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMANSSY
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaatgaaaaagtgactccccccgagtccatgaacgaggcagtaagcctgatctgggaa
taccagcaaaccaaagataacgatattgccacggtgctgatccgtaagtatgagccgatg
gtgaagatggcttccggcaaaattgcccgcaaccgtcctgatttatatgaagacttatac
caggtagggcagatggcgctgattcgtctgctccagcaatacgatatcagcatggggatt
ccttttgagccttatgcgatgaaaagcatgatcgggcatatgaagaattatctgcgcgat
aaatcctggtacattcaggttcccagacggatcaaagagaagggtgcgcttgtccagcag
gccattgatgaactgacaatcaagctggagcgttcgcctgcagtggacgaaattgcccat
tatctcgatctgtctgtggaagaaaccgtagaggtgctggccggcagagagtgctaccat
tacgtctcgctggactctccgctgtcccaggaagagagcggcgccacgcttggtgaatta
atctcttccgatgccaatgactatgagagtctggagaagcgcatggacctccagcaggcg
cttggacagctgaaggagcaagagcagcaggtactgctgttggcattccaggatggacag
tctcagcgtgccattgcgcagaagcttggcgtttcacagatgagcgtttcgcggattcag
aaacgggcgactgagaagctgaagcagattatggccaattcctcttattaa

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