Paenibacillus donghaensis: B9T62_29810
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Entry
B9T62_29810 CDS
T04971
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9T62_29810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdh03019
]
B9T62_29810
03009 Ribosome biogenesis [BR:
pdh03009
]
B9T62_29810
Enzymes [BR:
pdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9T62_29810
Messenger RNA biogenesis [BR:
pdh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9T62_29810
Ribosome biogenesis [BR:
pdh03009
]
Prokaryotic type
rRNA helicases
B9T62_29810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASA24582
UniProt:
A0A2Z2KSK7
LinkDB
All DBs
Position
complement(6555513..6557342)
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AA seq
609 aa
AA seq
DB search
MKNISEVENLPGFKELGISELLSTLLQGQGIVKPTPVQQEAIPPLVQGLDVIARAKTGTG
KTLAFLLPIMDKIYTEKAYPQALILAPTRELALQITEEARKLARHTDVKILAVYGGQDVD
KQLRKLEGGRHLIIGTPGRLLDHMRRGTLDLDGVKMLVLDEADQMLHMGFLEDVETIITA
VPYRRQTMLFSATMPDPVKRLAANYMKEPLDIIIKSGSPIPLDNIQQQVIECSDRNKEEA
LKGLIERDRPYLAIVFCRTKRRVSKLNEALREAGYDCDELHGDLSQGKREAVMKRFRDAK
LQLLVATDVAARGLDVEGITHIFNYDLPLDADSYIHRIGRTGRAGGKGLAITFVSPREQG
NLDLIEHGISQRLDRRRYEKDEFGVGEFSGILVGGGRHGGRQNAAPESARAGRGPKTASR
GAGRSGGAPREGGGARQGGRGRGKDAGGWAAPAEGRRSRGDAASGGKRSDYSAAPPKGGT
GAAKAAGVPRVGGGYGAFASRGESPAAPAAVSGAGAQRGVGKGRPSTGYSENVARGADGG
AYTGGKPRGGPGSGYGSAKGKGKSGGKAGFGGKGGRGTGGGTGSSGGSSRGGRSGGSGGF
KSGGRGTSR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaatataagtgaggtggagaatttgccgggttttaaagaattaggaatatcagaa
ttgttgagcacgttgcttcaagggcagggcatagtgaagcctacccctgtacagcaggaa
gcgattccgccattggtgcaagggcttgatgttatcgccagagccaagacaggaaccggg
aagacgctggcgttcctgctgccgattatggacaagatttataccgagaaggcttatccg
caggcgctgattctggctcctacacgtgagctggccctgcagattacagaggaggcccgc
aagctggcgcgtcatacagacgttaagattctcgcagtatacggcggccaggatgtggac
aagcagctgcgcaagctggaaggcggcagacatctgattatcggaacaccgggccggctg
ctggatcatatgcgccgcggcaccctggatctggacggcgtgaagatgctggtgctggat
gaggctgaccagatgctgcatatgggtttcctggaggatgtggagacgatcattacggcc
gttccttaccgccgccagacgatgctgttctcggcaacgatgcctgatccggtgaaacgg
ctggctgcgaactacatgaaagagccgctggacatcatcatcaagagcggttcgccgatt
ccgctggacaatatccagcagcaggtaattgaatgctctgaccgcaataaggaagaagcg
cttaaaggtctgatcgaacgcgaccggccttaccttgcgattgtgttctgccgcaccaaa
cggcgggtatccaagctgaatgaagcgctgcgtgaagcgggttacgattgcgatgagctg
catggcgacttgtcccagggcaaacgcgaagccgtcatgaaaagattccgcgatgccaaa
ctgcagctgctcgtagctacggacgtagccgcacgtggtctggatgtggaaggtatcacc
cacatcttcaactatgatctgccgctggatgcggacagctacatccaccggatcggccgt
accggccgtgccggaggcaagggcctggcgatcaccttcgtgtccccgcgcgagcagggc
aacctggatctgatcgagcatggcatctcgcagcggctggaccgccgccgttatgagaaa
gatgaattcggggttggcgaattcagcggcatcctcgttggcggcggccgtcatggaggc
cgccagaacgcagcgcccgagtcggcgcgtgccggacgcgggccgaagaccgccagccgc
ggcgcaggccgcagcggcggagcaccgcgcgaaggtggcggcgctcgccagggcggccgc
ggacgcggcaaggacgcaggcggctgggccgcgcctgcggaaggacgccgcagccgtggt
gacgcggccagcggcggcaagcgcagcgactacagcgccgcgccgccgaagggcggcacg
ggcgcagccaaggctgccggcgtgccgagagtcggcggcggctacggcgctttcgcctcc
agaggcgaaagcccagccgctccggcggcagtctccggcgcgggcgcgcagcgcggcgta
ggcaagggccgtccgagcactggctacagcgagaatgtagccagaggcgcagacggcgga
gcctacaccggcggcaagccgcggggcgggccaggcagcggctatggcagcgccaaaggc
aagggcaagagcggcggtaaagccggcttcggcggcaagggcggacgcggcaccggcggt
ggcactggaagcagtggcgggtcttcgcgcggcggccggagcggtggctccggtggcttc
aagagcggcggacgcggcacatccagataa
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