Paenibacillus donghaensis: B9T62_35740
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Entry
B9T62_35740 CDS
T04971
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pdh
Paenibacillus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdh03009
]
B9T62_35740
Enzymes [BR:
pdh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B9T62_35740
Ribosome biogenesis [BR:
pdh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B9T62_35740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
Cons_hypoth95
Methyltransf_32
Methyltransf_12
N6_N4_Mtase
Methyltransf_23
UPF0020
PCMT
RrnaAD
TPMT
Motif
Other DBs
NCBI-ProteinID:
ASA25619
UniProt:
A0A2Z2KRW7
LinkDB
All DBs
Position
7857986..7859674
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AA seq
562 aa
AA seq
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MNKHRSGRSTGRRSRPAPVAGLPVNKNDEVTLDIIGMTHDGEGVGRVEGFTLFVLGALPG
EKVRAKVLKVKKQYGYAKLLEVIEASSDRVTPPCEIYDRCGGCQLQHLSYTAQLAWKRQL
VVDNLQRIGKLQVAGAPAMRRAGESKQAEAGGQAALGGSGAATGRVEMNDAGEPADVQVA
GVDSVNGGVADPAVVDNSADTQQVQPAAAIADTTGILVRPTLGMDEPWRYRNKAQVPIGV
ANGELIGGFYSRGTHRIIDMDTCLIQHESNDDVVRKVKAIARRLGIMPYDEETGQGLLRH
VVAKVAFRTGEMMVVLVTNGDRIPQQEEWISEIRREMPAVTSICQNINTKQTNVIFGDIT
RTLWGNEVIYDYIGDVKFAISARSFYQVNPPQTEVLYGKTVEYAGLTGKETVIDAYCGIG
TISLFLAQHAKQVYGVEIVPEAIEDARANAQLNGMNNVTFEVGASEDVIPAWKEQGITPD
VIVVDPPRKGCDARLLDTILEMKPERVVYVSCNPSTLARDLRVLEDGGYRTVEVQPVDMF
PHTVHVECVVSIYRKDMLERDA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaccgcagtggacgcagcacgggccgccggagccgcccggcgccggtcgcc
ggactgccagtgaataagaatgatgaggtcacgctcgatattatcggcatgacccatgac
ggtgaaggggtaggccgcgtggaaggctttaccctttttgtgctgggggccctgcccggt
gagaaggtccgggccaaggtgctcaaggtcaagaagcaatatggctacgccaagctgctg
gaggtaattgaagcgagcagtgaccgcgtcacgccgccctgcgagatctatgacagatgc
ggcggctgccagctgcagcatctgtcatacacagcgcagctggcgtggaaacgccagctg
gtggtggacaacctgcagcggatcgggaagctgcaggttgcgggcgcgcctgcgatgcgc
agagctggcgagagcaagcaggccgaagcaggaggccaagcagcgcttggcgggagtgga
gccgctacaggacgcgtcgaaatgaatgacgcaggcgaacctgcggatgttcaagttgct
ggtgtggatagtgtgaacggtggagtggctgaccctgctgttgtagacaactctgctgat
acgcagcaggttcagcccgctgctgcaatagcggataccacaggtatccttgtgcgtcct
acgcttggcatggacgagccttggcgttaccgcaacaaggcccaggtgccgattggcgtg
gccaacggggagctgatcggcggattctattcgcgtggcacacaccggatcatcgacatg
gatacctgcctgatccagcatgagagcaacgatgatgtagtccgcaaggtgaaggctatc
gcccgccggctcggaattatgccctatgatgaagagaccggccaaggcctgctgcgccat
gtggtggcgaaggtagcttttcggaccggggagatgatggttgtactggtcacgaacggt
gaccgtattccgcagcaggaggagtggatcagcgagatccgccgtgagatgcctgccgtg
accagcatctgccagaacataaatacgaagcagacgaatgtgatttttggcgacattaca
cgcacgctctggggcaacgaggttatttacgattatatcggtgacgtgaaattcgccatt
tctgcccgttcattctatcaagtgaacccgccgcagaccgaggtgctctatggcaaaacc
gtggagtacgccggacttaccggcaaagagaccgtgatcgacgcctactgcggtatcgga
acgatctcgctgttccttgcccagcatgccaagcaggtctatggcgtggagattgtgccc
gaagccatcgaagacgcccgcgccaacgcgcagttgaacggcatgaacaacgtgaccttc
gaggtaggcgcctccgaagatgtaattccggcctggaaagagcagggcatcacccccgat
gtaatcgtggttgatcccccgcgaaagggctgcgatgctcgtctgctggacaccatcctg
gagatgaagccggagcgcgtggtgtatgtatcgtgtaatccttcgacattggcgagggat
ttgagggtactggaggatggcgggtatagaacggttgaggtgcagccggtggatatgttc
ccgcatacggtgcatgtggagtgtgtagtgtcaatatatagaaaagatatgttagaaagg
gatgcctaa
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