Parabacteroides distasonis: BDI_0282
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Entry
BDI_0282 CDS
T00549
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
pdi
Parabacteroides distasonis
Pathway
pdi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BDI_0282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_0282
DNA repair and recombination proteins [BR:
pdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BDI_0282
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BDI_0282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SF0329
Viral_helicase1
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABR42067
UniProt:
A6L8Q3
LinkDB
All DBs
Position
315285..317306
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AA seq
673 aa
AA seq
DB search
MNFEISSSFSPTGDQPEAIAALSEGIKSGVPFQTLLGVTGSGKTFTIANVIKEVQRPTLI
LSHNKTLAAQLYSEFKAFFPNNAVEYFVSYYDYYQPEAYLPSTDTYIEKDLAINEEIDKL
RLRATASLLSGRKDVIVVSSVSCLYGMADPTAFAEKVTHLERGMRIDRDKLLRRFVDALY
VNNKLEFKSGCFRVNGDTVDIFPAIETFDGMAYRIEFWDDEIDRISSFNPLTGEEYDEQD
ELNIYPTNLFVTTQERINMAIGQIDVDLGTQVNFLKEIGKPFEAKRLYERVTFDLEMIRE
LGHCSGIENYSRYFDGRAAGDRPFCLLDYFPKDFLLVVDESHVTIPQIRAMYGGDYARKK
NLVEYGFRLPSAMDNRPLTFDEFESLTPLGIYVSATPADYELIKSEGVVVEQVIRPTGLL
DPIIDVRPSLNQIDDLMEEITQRSAKDERVLVTTLTKRMAEELTTYMTRMGVRCNYIHSD
VDTLERVQIMDDLRNGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTA
GRAARNVNGKVIFYADKITASMQQTMDETNRRREKQMAYNEAHGITPKQVMKNSVSMLAE
KQQTAEPYAYIEPEPSLVADPVVQYMNRTQLEKAIERTRKQMTEAAKKLDFIEAAQFRDE
LVKLEDLLKTKKD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaatatcgtcttcgttcagtcccacgggtgaccaacccgaggcgattgcg
gcgttgtcggaagggatcaagagtggtgttcctttccagacacttttgggtgttaccggt
tccggtaagacgtttacgatcgctaacgtgataaaggaagttcagagaccgaccttgata
ctcagtcataataagacgcttgccgctcagttgtacagtgagtttaaagcgtttttccca
aataatgcggtagagtactttgtctcttattatgattattaccaaccggaggcctatcta
ccttctaccgatacctatatagagaaagacttggcgatcaatgaggagatcgataagctg
cgtttgagggccacggcttccttattgtcgggtcgtaaggacgtgatcgtggtctcatcc
gtatcctgcttatatggcatggcagaccctacggctttcgccgagaaagtgacgcatctg
gaacggggtatgcgtatcgaccgggataagctgttgcgccggtttgtagacgccttgtac
gtgaataataagctggagttcaaaagcggctgtttccgtgtgaatggtgatacggtggat
attttcccggcgatcgagaccttcgacggcatggcgtaccgtatcgagttctgggatgat
gagatagaccgcatctcctctttcaatccgttgacaggcgaggagtatgatgagcaagat
gagctgaatatttatcctaccaatttattcgtgaccacccaagagcgtatcaatatggcg
atcggtcagatcgatgtggatctggggacgcaggtgaatttcctcaaggagatcggtaag
cccttcgaggcgaaacgcctgtatgagcgtgtcacgtttgatctggaaatgatccgggag
ctagggcattgctcgggtatcgagaactattcccgttatttcgacggacgcgcggcggga
gatcgtcctttctgcctgttggattatttcccgaaagacttcctgcttgtcgtagacgag
agccatgtgacgatcccgcagattcgtgcgatgtatggcggggattatgcccggaagaaa
aacttggtggagtatggtttccgtttgccctcggcgatggataaccgtccgcttaccttc
gatgagttcgagtcgttgacgcctctaggcatttatgtgagcgctactcccgccgattac
gagttgataaagagcgagggagtggtggtggagcaggtgatacgtccgacaggcctgctg
gacccgattatcgatgtccgtccttcattaaaccaaatcgacgacttgatggaggagatc
acgcagcgctcggcaaaagacgaacgagtcttggtgactaccttgaccaagcgtatggcg
gaagagctgactacgtatatgacccgcatgggggtacgatgcaactatatacatagcgat
gtagataccttggaacgtgtacagattatggacgacctgcggaatggcctgtttgatgtg
ctgatcggtgtcaatctgctacgcgaggggctggatttaccggaagtctcgttggtcgct
atcttggatgcggataaggaaggctttttgcgttcccaccgatccttgacgcagacagct
ggacgtgccgcccgaaacgtgaatggaaaggttatcttctatgccgataagatcacggcg
agtatgcagcagaccatggacgagaccaatcgccggcgggagaaacagatggcttataac
gaggcgcatggcattactccgaagcaagtcatgaaaaacagtgtatccatgcttgccgag
aaacaacaaacggcggagccttacgcttatatagagccggaaccaagcttggtagcggac
ccggtcgtgcaatacatgaaccgtacgcagcttgagaaggcgatcgagcggactcgcaaa
cagatgacggaagcagcgaagaaactggatttcatcgaggctgcccaattccgtgacgag
ctggtgaaattggaggatttactgaaaacgaaaaaggattag
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