Parabacteroides distasonis: BDI_0925
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Entry
BDI_0925 CDS
T00549
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pdi
Parabacteroides distasonis
Pathway
pdi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BDI_0925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_0925
DNA repair and recombination proteins [BR:
pdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BDI_0925
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BDI_0925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_14
nSTAND1
AAA_22
Viral_helicase1
AAA_18
AAA_33
T2SSE
ATPase_2
AAA_23
NACHT
cobW
NTPase_1
PRK
Motif
Other DBs
NCBI-ProteinID:
ABR42693
UniProt:
A6LAH9
LinkDB
All DBs
Position
1063819..1066674
Genome browser
AA seq
951 aa
AA seq
DB search
MIKDKQALEGGRISILGARVHNLKNIDVEIPRNKLTVITGMSGSGKSSLAFDTIFAEGQR
RYVETFSAYARNFLGNMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDFFRLL
YARAGEAYSYLSGEKMVKYTEDQVLRLILDEYNGKKTYLLAPLVRNRKGHYKELFEQIRK
KGYLNVRVDGELKEIFHGMKLDRYKMHSIEVVIDKMIVSEADERRLKESLKIAMKQGDGL
VLILDAETNEVRHYSRRLMDPVTGLSYSEPAPHNFSFNSPQGACPKCKGLGQVNLLDMDK
IVPDPSLSIYSGGIVALGKYKNSLIFWQIEALCQKHGVTIKTPIRDIPEEAMDEIMNGTD
ERLQIKNDSLGSSNYFLSYEGVAKYILMQQESEASASAQKWAGQFIKMATCPECNGWRLN
KEALSYRIAGKNIAELSAMDISELYEWLEGIEEKLDPKQLRIATEILKEIRSRLRFLLDV
GLDYLSMNRGSATLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNVRLINSLKQ
LRDTGNSVIVVEHDKDMMLSADYVVDMGPKAGRLGGEVVFEGTPKEMLRVDTLTSSYLNG
NTEIAVPAERRKGNGQFITIKGASGNNLKHVDVSFPLGTLICVTGVSGSGKSTLINRTLQ
PILSQHFYHSLEDPLAYDVIEGIEHVDKIVNVDQSPIGRSPRSNPATYTGVFSDIRNLFV
ELPESKVRGYKPGRFSFNVSGGRCETCKGNGYKTIEMNFLPDVLVPCEDCHGKRYNRETL
EVRFRGKSIADILDMTINMAVEFFENIPTILSKIKVLQDVGLGYIKLGQPSTTLSGGESQ
RVKLATELAKRDTGKTLYVLDEPTTGLHFEDIRVLLGVLNKLVDKGNTIIVIEHNLDVIK
SADYLIDMGPEGGRRGGNVLFTGTPEALAKSGVGFTAPFLKEELDIANKKK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagataagcaggcattggaaggcgggcgcatatccatacttggcgcacgtgtt
cataatctgaagaatatagatgtagagattccgaggaataagttgacggtgattaccggc
atgagtggtagcggcaagtcatcattggcgttcgatacgattttcgctgagggacaaagg
cggtatgtggagacattctcggcttacgcccggaatttcttagggaatatggagagaccc
gatgtggataagataacgggtctgagtccggttatctccattgagcaaaagacaaccaat
aagaatcctcgttccaccgtcggtacgactaccgagatctatgactttttccgtttgctt
tacgctagggcgggagaggcctattcctatttgagcggggagaagatggtgaaatatacc
gaggatcaagtcttacggctgatcttggatgagtacaacgggaaaaaaacgtatctcttg
gctccgttggtccgtaatcgtaaggggcactataaggaacttttcgagcagatacgtaaa
aaaggatatctgaacgtccgtgtcgatggcgagttgaaagagatcttccatgggatgaag
ctggatcgttataagatgcacagcatcgaggtggtgatcgataagatgattgtctccgag
gcagacgagcgtcgtttgaaagagagcttgaagatcgccatgaagcaaggcgatggcctt
gtgctgatactggatgccgagactaacgaggttcgccattatagtcgtcgtttgatggac
ccggtgaccggattgtcttacagtgagccggctccgcataatttctcgttcaactcccct
caaggagcgtgtccgaaatgtaaaggcttaggacaggtcaatttgttggatatggacaag
atcgttcccgatccatccttaagtatatatagcggtggcatcgtcgctttgggtaaatat
aagaattcgttgatattctggcagattgaggcgctttgccaaaagcatggcgtgacgatc
aagacgcctatacgggatattcccgaggaggcgatggacgagatcatgaacggtacggac
gagcggttgcagatcaagaatgactcgttaggatcgtctaactattttttgtcgtatgag
ggagtcgccaagtatatcttgatgcaacaggagagcgaggcatccgcctcggcgcagaaa
tgggcgggacaattcatcaagatggccacttgtccggaatgtaacggctggcgattgaat
aaggaggcgttgagctaccggatagcgggaaagaatatcgccgagttgtcggccatggat
atctcggaattatacgagtggctggagggtatcgaggagaagctggacccgaaacagctt
cggatcgctacggagatattgaaggagatacgctcccgcctgcgcttcttgctggatgtg
ggattggattatctttccatgaaccggggttccgctaccttgtctggcggtgagagccag
cgtatccgtttggctacccagatcggaagtcaattggtgaacgtactttatatattggat
gagccgagtatcggtttacaccaacgggacaacgtccgtttgattaattccctgaaacaa
ttgcgtgatacgggaaactccgtgatcgtcgtggagcatgataaggatatgatgctgagt
gccgattacgtggtggatatggggcctaaagcgggccgtctgggtggtgaggtcgtcttt
gagggaacgcccaaggagatgttgcgtgtagataccttgacctcttcctatctgaatgga
aacacggagatagccgttcctgccgagcgtcggaaaggcaacgggcagtttattacgatc
aagggagccagtggcaataacctgaagcatgtggacgtgtcttttcccttgggtacgctt
atttgcgtcacgggtgtgtcgggtagcggaaagtctaccttgataaatcgcacgctgcaa
ccgatcttgagccagcatttctatcactcgctggaagaccccttggcatacgacgtcatc
gagggaatcgagcatgtagataagatcgtgaatgtggatcaatctccgatcggtcgttcc
ccccggagcaacccggctacctatacgggggtattctcggatatccggaatctgttcgtg
gaacttccggaatcgaaggtgagagggtataaaccgggacgtttctcttttaacgtatcg
ggcggacggtgcgagacctgtaagggaaatggctataagacgatcgagatgaatttccta
ccggacgtgctggtgccttgcgaggattgtcacggcaagcgatataaccgggaaacccta
gaggttcgttttcgtgggaaatcaattgcggatatcttggatatgacgattaatatggca
gtggagttcttcgagaatatcccgacgatcttatccaagatcaaggtcctgcaagatgta
ggtctgggatatatcaagttggggcaaccctctactaccttatccggtggcgagagccaa
cgtgtcaagctggctaccgagctggcgaagcgggatacgggaaagacgctttatgtattg
gatgaacctaccaccggtctgcacttcgaggatatccgggtcttgctgggggtattgaac
aagttggtggataaaggcaacacgatcatcgttatcgaacataacctcgatgttatcaag
agcgccgattacttgatcgatatgggccccgagggcggtcgccgtggaggcaatgtcctt
tttaccggaactccggaagctttagcaaagagtggcgtcgggtttacggctccgttcttg
aaagaagagttagatatagcaaataagaaaaaatga
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