Parabacteroides distasonis: BDI_1029
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Entry
BDI_1029 CDS
T00549
Name
(GenBank) glycoside hydrolase family 23
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pdi
Parabacteroides distasonis
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdi01011
]
BDI_1029
Enzymes [BR:
pdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BDI_1029
Peptidoglycan biosynthesis and degradation proteins [BR:
pdi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BDI_1029
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ABR42795
UniProt:
A6LAT1
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All DBs
Position
complement(1191156..1192541)
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AA seq
461 aa
AA seq
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MYRKYVPFLLFLFFLYGCNGNKQEEKEDVSVFVDLPQLKAEGEITAVTLYSSTSYFQYKM
QPMGYEYDLINDFAKSQGLKLNIKVAENPARLIEMLEAGEVDVVAYPIPINNKLKQEVIY
CGREDISSQVLIQRANKGDKLLTDVTQLIDKNVYVKPNTKYSERLKNLDEELGGGIHIQK
VENDSIATEDLIEMVSLGEIPYTISDDNTARLNKTYYWNINVDLKVSFPQRSSWVVRKSS
PDLAKAIDEWASDKTGKHSFKAVTKRYFELSKQPFTADIPEVKNGHISPYDPLFKKHAKN
IGWDWQLLASISYQESHFNPTVVSWAGAEGLMGIMPNTAKALGVTPHELKDPDTGIRTGV
DCLRRFRQGFSEITDPEEKVKFTLAAYNAGIGHIYDAQRLARKYGKDPNKWDNNVAEYIR
LKNDPEYYNDPVCKHGYLRGSETYNYVREVLERYHYYKKKS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtataggaaatacgtcccctttctgctctttttgttcttcttgtatggttgcaacggt
aacaaacaagaggagaaagaggacgtttccgttttcgtggatttaccgcaactgaaagcg
gaaggcgagatcacggcggtgactttatacagttctacctcctacttccaatataagatg
caacccatgggttacgaatacgatctgataaacgattttgccaagagccaaggtttgaaa
ttaaacatcaaggtcgccgagaatcctgcccgtctgatcgagatgctagaagccggcgag
gtcgatgttgtagcctaccctatcccaatcaataacaagctgaaacaagaggtcatttat
tgcggccgggaggatatctccagtcaagtattgatacaacgggccaataaaggcgataag
cttcttaccgatgtcactcaattaatcgataagaatgtttacgtaaagcctaacaccaaa
tactccgaacgactgaagaacttggatgaggaactcggcggaggaatccatatccaaaaa
gtggaaaatgactccattgctaccgaagatcttatcgagatggtctccttgggcgaaatt
ccctatacgatcagcgatgataacaccgcccgcctaaacaagacttattattggaatatc
aatgtcgacctaaaggttagttttccccaacgttcttcatgggtggtaaggaaaagtagt
ccggacttggcgaaggcgatcgatgaatgggcttccgataaaacgggtaaacattctttc
aaggcagttactaagcggtactttgaattaagcaagcaaccttttaccgcagatattccg
gaggtaaagaatggacatatttccccgtatgaccctttattcaagaaacatgcgaaaaac
atcggatgggattggcagctgctggcgtctatttcctatcaagagtctcatttcaatcct
acggttgtatcgtgggccggtgccgaggggcttatgggaatcatgccaaatacggcgaag
gcattaggtgtcaccccgcatgaattgaaagatccggatacgggaatccgtacgggagta
gattgtttacggcgcttccgtcaaggtttttctgagattacggatcctgaagaaaaagtc
aagtttaccctagcggcttacaacgctgggatcggacatatttacgatgcgcagcgattg
gcccgaaaatatggaaaagatcccaataaatgggataataatgtagcggaatatattcgt
ttgaaaaatgatcccgagtattataacgatcctgtttgcaagcatggatacttgcgtggc
tcagaaacatataattacgtgcgggaagtgttggagcgttatcattactacaagaaaaag
tcatag
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