Parabacteroides distasonis: BDI_1132
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Entry
BDI_1132 CDS
T00549
Name
(GenBank) putative helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pdi
Parabacteroides distasonis
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdi03009
]
BDI_1132
03012 Translation factors [BR:
pdi03012
]
BDI_1132
Enzymes [BR:
pdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BDI_1132
5.6.2.5 RNA 5'-3' helicase
BDI_1132
Ribosome biogenesis [BR:
pdi03009
]
Eukaryotic type
Other ribosome biogenesis factors
BDI_1132
Translation factors [BR:
pdi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
BDI_1132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
nSTAND3
SLFN-g3_helicase
AAA_16
AAA_22
ResIII
DEAD
Helicase_RecD
AAA_25
ATPase
AAA_5
PhoH
T2SSE
UvrD_C_2
AAA
Herpes_ori_bp
NPHP3_N
cobW
AAA_28
AAA_7
NTPase_1
AAA_24
HEM4
Nop53
Motif
Other DBs
NCBI-ProteinID:
ABR42895
UniProt:
A6LB31
LinkDB
All DBs
Position
1305678..1307600
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AA seq
640 aa
AA seq
DB search
MGISSPLVDLQNQYDLLQKEYEYEKETYRQQSERTGLRKRVAQGLCWYPVTPGRSYYNSL
NQLVIEIERTEDREIEHNFEYGRPVCFFTADISGKFKYLDFSATISYVQEDRMVVVLPTP
SALMDIQGKSNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQREL
FPIRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQS
NTAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQ
SNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHF
TTLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT
KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT
ENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRKLIK
QDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRARMK
LMILGDASTLTRHAFYKELYNYISQRGKIITINTKQEHEL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttcatcgccgcttgttgatttgcaaaatcaatatgatctcctgcagaaagaa
tatgaatatgagaaggaaacataccgacagcaatccgagcgtacgggtttgcgaaaacga
gtggcgcagggcctctgttggtatccggtcactccgggacgcagttattataactcctta
aaccaattggtgatcgagatcgaaaggacagaagaccgggagatcgagcataattttgag
tacgggcgcccggtttgcttctttacggcagatatcagtggtaaatttaagtatctggat
ttctccgccacgatcagctacgtgcaagaggaccggatggtggtagttctccccactcct
tccgccttgatggatatacaaggaaaaagcaatgatctcggcgtgcaactctacttcgac
gagaccagctataaaacgatgttttccgctctctcggacgtgatgcgggcaaaaaacaac
caactctctcatctaagggatgtattgctgggacaggaaaaaccgggacagcgggaatta
ttcccgatccgcttcccttggttgaaccgctcgcaggaagaagccgtaaataaggtattg
ggagcgaaacaagtatctatcgtacacggccctcccggaaccgggaaaacaaccaccttg
gtggaagccatttacgagacccttcaccgggagaatcaagtgatcgtttgcgctcaaagc
aataccgccgtagactgcatctcggagaaactggtagatagaggcattaacgtcctgcgc
atcgggaaccccactcgtatcaatgacaagatgctctctttcacatatgaacgccgtttc
gaatcgcatccggattatcccgaattatggagcatccggaaagcgatacgggatatacaa
tccaatatgcgaaagaaaagccgggaggaacgggatacgatccgaaaccgcctctcccgt
ttgaaattccgggcgaccgaactggaagtcaagatcgatacagagctgttcgacgaggct
cgtgtcgttgcttgcaccttggttggctccgcaaaccgggtcatgatgaaccggcacttc
acgaccttgtttatcgatgaggccgcccaagccttggaagctgcttgctggatagcgatc
agcaaggcggaccgggtcatactagcgggcgatcatcaccaattgccccctactattaaa
tgtatagaagcggaacgagaaggcttaggacgtaccttgatgcaaaagatagcccacacg
aaaccggaaacggtctctctcctgaagatccaatatcgtatgcacgaggatatcatgcgc
ttctcctcccaatggttctatcataacgaactcgaatccgctcccgaggtaagtgggcgg
ggaatcttgcgactggacactcccatcgtatggttcgatacgtccgagtgcgatttcacg
gaaaatacgagagaagagaccatgagccgtgtcaacaggcaagaggcggaattgctcgtg
gaacaattacgctcctatatacagaaaatatccaaggagagagtgctggaggagaatatc
gacttcggattgatctccccttataaggcgcaggtacaatacatccgtaaattaatcaaa
caggacgctttcttcaagcctttacgcagactgattaccgtacataccgtagacggtttc
caagggcaagaacgcgatgtcatcttgatcagtttggtaagggccaacgaggatggaaag
ataggcttcttgaacgacttgcggcgcatgaacgtagcgatcacccgtgcccgtatgaaa
ctgatgatcttgggagacgcttccacccttacccggcacgcattttataaagaactctat
aattatatctcccaaagaggtaaaataatcacgatcaacacgaaacaagagcatgaacta
taa
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