Parabacteroides distasonis: BDI_1243
Help
Entry
BDI_1243 CDS
T00549
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
pdi
Parabacteroides distasonis
Pathway
pdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BDI_1243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_1243
DNA repair and recombination proteins [BR:
pdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BDI_1243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
RSRP
Motif
Other DBs
NCBI-ProteinID:
ABR43004
UniProt:
A6LBE0
LinkDB
All DBs
Position
1441851..1444319
Genome browser
AA seq
822 aa
AA seq
DB search
MIYPQNFEQKTGFDKIRHLITEKCLSPLGEERVAEMGFSADFEVVSKRLEQTDEFIRILH
GDTEFPASYFFDVRYSLKRIRPEGTWLDERELFDLKRSLQTINDIVRFFKPMDDEEIKYP
ALTELAGDIFVFPQLIGKIDSILDKFGKVKDSASSTLSQIRREMTITMSGISRSLQSILR
AAQSDGVVDKDVTPTMRDGRLMIPVAPAFKRKIKGIVHDESASGKTVFIEPEVVVEANNR
IRELEGEERREIIKILTEFTNVIRPLAPDILQSYEFLADIDFIRAKALFAEQVKAIKPIV
EDKRQMDWVRAVHPLLFLSLQKQGKQVVPLDIELTEGKRILIISGPNAGGKSVCLKTVGL
LQYMLQCGLLIPLHERSRTGIFEHIFIDIGDEQSIENDLSTYSSHLTNMKYFVKNCNERT
IILIDEFGSGTEPQIGGAIAEALLDRFNRNHSFGVITTHYQNLKHFAEDTEGIVNGAMLY
DRHLMQPLFKLSIGNPGSSFAVEIARKIGLPEDVIADASANVGADYINMDKYLQDIVRDK
RYWESKRQNIRQQEKKLEDVTSRYEQDLEAVNKQRKEIIREAKAEAQRILAEANAKIENT
VREIKEAQAEKEQTKLARKALEEFKNSVMATEEEDDKIARKMAKLKERNERKKQKQKVTA
QPIFNKEVIEVGDNVRLKGQVSAGTVMELQGKQAVVAFGMIKSTVKLEQLEKVSKGQIKR
EIQKSTFVSSQTTDNMHEKKINFKQEIDVRGMRGDEALQSVTYFIDDAIQVGAGKVRILH
GTGTGILRQLIRDYLRTVPGVRRFQDEHVQFGGAGITVVEFD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
gtgatatatccacaaaattttgaacaaaagacgggctttgataagatccgtcacttaatc
acagaaaaatgtttaagcccgctcggggaagagcgggtagcggagatgggattctccgcc
gatttcgaggtcgtatccaagcgattggaacaaaccgatgagtttatccgtatcctacac
ggagacacggaattccctgccagttatttcttcgacgtgcgctattccttgaaacggatt
cggccggaaggtacttggctggatgaacgggagttgttcgacctcaaacgttccttgcaa
acgatcaatgacatcgtacgcttcttcaagcctatggacgatgaggaaatcaagtatccg
gccttgactgaattggcgggagatatctttgtcttcccccaattgattggaaagatcgat
agtatcctcgataaattcggcaaggtcaaggacagtgcttcctccaccctatcgcaaatc
cgcagggaaatgacgatcacgatgagcggtatttcccgcagcctgcaatccatcctccgt
gcggcacaatcggacggggttgtcgataaggacgtgacaccgaccatgcgcgacggtcgt
ttgatgatcccggtagccccggccttcaaacgaaagataaaaggtatcgtacatgatgag
tccgccagtggcaagacggtctttatagagccggaggtggtcgtggaagcgaataaccgc
atccgggaactggaaggggaagaacgccgggaaatcattaagatactgacggaattcacg
aacgtgatccgtcctttagctccggatatcctacaatcttacgagtttcttgccgacatt
gacttcattcgtgcgaaagcgttattcgcggagcaagtcaaggcgatcaagccgatcgtg
gaggataagcgacaaatggattgggtacgtgccgtgcatccgctcttattcctgtcttta
cagaaacagggcaagcaggtagttcccctcgatatcgagctgaccgagggaaaacggatc
ttgatcatatccggtccgaacgccggtggtaaatccgtttgcctgaaaacggtcggatta
cttcaatacatgttgcaatgtggtttattgattcctttgcatgagcgatcaagaaccggg
atcttcgagcatatattcatcgatataggcgatgagcaaagcatcgagaacgatttgagt
acctacagttcccaccttaccaacatgaagtatttcgtgaagaattgtaacgagcggacc
attatcctaatcgatgagttcggtagcggtacggaaccccagattggcggcgctatcgcc
gaggctttattggatcgcttcaaccggaatcatagctttggggtaatcacgacccactac
cagaatttgaagcatttcgccgaggatacggaaggtatcgtaaacggtgccatgttgtac
gaccgccatttgatgcagcccttgttcaagctttctatcggaaatccgggtagctctttt
gccgtagagatcgcacgcaagatcggtctgcccgaggacgtgatagccgacgcttccgcg
aacgtcggagcggattatatcaatatggacaaatacctgcaagatatcgtacgcgataaa
cggtactgggaaagcaaacggcagaatatccgtcagcaggagaaaaaactggaagatgtc
acttcccgttatgaacaagacttggaagccgtaaacaagcaacggaaagagatcatccgg
gaggcaaaggccgaggcccaacgtattctagcggaggctaacgccaagatcgagaatacc
gtccgtgagatcaaggaggcccaagcggaaaaagaacagaccaaactggcccgcaaagcc
ttggaagagttcaagaactccgtcatggcgaccgaagaagaagacgataagatcgcacgc
aagatggcgaagctcaaggaacggaacgaacggaagaaacagaaacaaaaagtgacggcc
cagccgatatttaataaagaggtgatagaggtcggcgacaatgtacgccttaaagggcag
gtttccgccggaaccgttatggaactacaaggaaagcaggccgtagtagcattcgggatg
atcaaaagcacggttaagctggagcagttggaaaaggtaagcaaaggccagatcaaacgg
gaaatccagaaaagcacgttcgtcagctcccagaccactgacaatatgcatgagaagaag
ataaactttaagcaagaaatcgatgtgagaggaatgaggggcgatgaggcattgcaaagc
gtgacttattttatcgacgacgccattcaagtcggggcaggcaaggttcgcatcttacat
ggaaccggtacgggtatcttacgtcagctaatccgggattatctgcgcacggttcccggt
gtccgtcgctttcaagacgagcatgtgcagttcggaggcgccggtatcaccgttgttgag
tttgattaa
DBGET
integrated database retrieval system
