Parabacteroides distasonis: BDI_1729
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Entry
BDI_1729 CDS
T00549
Name
(GenBank) ATP-dependent exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pdi
Parabacteroides distasonis
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_1729
DNA repair and recombination proteins [BR:
pdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BDI_1729
Archaeal homologous recombinant proteins
BDI_1729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND_NTPase5
nSTAND3
AAA_22
RsgA_GTPase
Adeno_IVa2
cobW
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABR43476
UniProt:
A6LCR2
LinkDB
All DBs
Position
complement(2044986..2047967)
Genome browser
AA seq
993 aa
AA seq
DB search
MRVLAIRGRNLASLEGEFSIDFTEEPLASAGIFAISGPTGAGKSTLLDAMCLALFSRTPR
TELAKENNVRLRDVQEDVLPQSDPRFLLRRGTASGYAEVDFVALNGCRYRARWSVSRARE
KESGRLQAARLTLYNIDAGKEEPGTNKDLQARIIELIGLTFDQFTRSVLLAQNDFSTFLK
AEQGEKASLLEKLTGTEQYSEISRRIFAKNAEAKEAYEQLYARVQDIELLSEEEVEASQT
RLSALEVELARLEKARAERQSLREAVKAAEVQIASKEKQREENARFLERALASLETSRKE
YEQGEVRLARTDEESKGLRLELQQARKLDVQLESALKARSEADERMKDFSRRKQEAEEKL
RKVEERQKKASEEWDKLTSWRERYRSKEGIAEQLSALLIHLDTCLTARRAVERSDKALLA
IRQKIQRLEVRRQSLRREAETHAKEQVKIEEERKSVALALQELEPEALDRSIETCRTERE
RLLLEQAQFVTTGDIKSLRDKLTAGTPCPVCGSLEHPFASHEAHERLLALADRISEATLR
LKRLLDRKERQEACGKQLAALQQKELELHKQLAADENARTELRNQLQSLSEQIDREELDK
REQQEKLSQSLSAANALFGNDAWQTGWNKDPESFRETLTDFARQWQANGERLRELERERS
AHQAERESYEAFLPPLRKQYEDAAKAYDEKNQSYTRLRSERNLLLGGQPADQVERTFHER
VEALKSHLKQLQESTTRHAGEVEQYRGGTEQIKKDLAETSGLLSARRQELDNWMVAYQEN
SEGKTLEESLSEMTAQKSECSFRLRTHEENKRKIAGFQQELSERRAMSERWAKLNELAGS
ADGAKFRRIAQGYTLDVLLSYANVQLRQLSRRYRLERVPDTLALQVIDQDMCDEIRTVHS
LSGGESFLVSLALALGLSSLSSNRMKVESLFIDEGFGSLDAETLRVAMDALESLRTQGRK
IGVISHVQEMTERIPVQIRVNRAGNGRSYLEVI
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgctggcgatcagaggacgcaaccttgcgtcgttggaaggagagttctccatt
gattttacggaagagcctttggcttcggcgggtatcttcgctatatccgggcctacgggg
gcaggaaaatccacgttgctggatgccatgtgcctcgccctcttctcccgtacgccgcga
acggagctggcgaaggagaataacgtgcggctgagggacgtgcaagaggatgtgttgccg
caaagcgacccccgcttcctcttgcgccgcgggacggcctcgggctatgccgaggtggat
ttcgtggcgctgaacgggtgtcggtatcgcgcccgctggtccgtatcccgggcccgggag
aaggagagcggacgtttgcaggccgcccgccttacattatataatatagatgccgggaaa
gaggagccgggaaccaacaaggacctgcaagcccgtatcatcgagctgatcggcctgact
ttcgatcagttcacccgctcggtgctcttggcccagaacgatttctctaccttcctgaaa
gcggagcagggcgagaaggcctccttgctggaaaaactgaccggtacggagcaatactcg
gagatctcccgccggatcttcgccaagaacgccgaggcgaaggaggcctacgagcagcta
tacgcccgcgtacaagacatagagcttctgtcggaggaggaggtggaagcctcccaaacc
cgcctttcggccttggaggtggagctggcccgtctggagaaggcgagggccgagcggcaa
agcctgcgggaggccgtgaaagcggccgaggtccagatcgcctcgaaggaaaaacagcgg
gaggagaacgcccgtttcttggaacgggcgttggcatcgctggaaacctcaaggaaggag
tatgagcaaggagaggtgcgattggcgaggacggatgaggaatctaagggcttgcgactg
gaattgcaacaggcccggaaactggacgtgcaactggaatcggccttgaaagcccgctcc
gaggctgatgaacggatgaaagacttctcccggcggaagcaggaggcagaagagaaactc
aggaaggtggaagagcggcagaagaaagcctcggaggaatgggacaagctgacgtcgtgg
cgtgaacgttaccggagcaaggaggggatcgccgagcaactgtcggccttgttgattcat
ctggatacctgccttacggctcgccgggcagtcgagcggtcggacaaggccttgctagcc
atccgacagaaaatccagcggttggaggttcggaggcaatccttgcggcgggaggcggag
acgcacgccaaggaacaggtaaagattgaggaagagcggaagtccgtagcgcttgccctc
caggaattggaaccggaggctttggaccggtcgatcgagacctgccgtacggaacgggag
cgtttattgctggagcaagcccagttcgtgacgactggcgatatcaaaagcctgcgggac
aagctgactgccggaacgccttgcccggtctgcggaagccttgagcatcctttcgcctct
cacgaggcgcatgagcgcctgttggccttggcggatcgcatctcggaagctaccctgcgc
ctcaagcggcttctcgaccggaaagaacggcaggaggcctgcgggaaacaactcgccgcc
ctgcaacagaaagaattggagctgcataaacaactcgccgcggacgagaacgcacggacg
gaattaaggaaccagttacaatccttgtccgagcaaatcgaccgggaagaactggataag
cgggaacagcaggagaagctgtcccaatccctatcagcggccaacgccctgttcgggaac
gacgcatggcagacgggctggaacaaggacccggaaagcttccgggagaccttgacggat
ttcgcccgccagtggcaagccaacggggaacgcctgcgggaactggaacgggagcggagc
gcccatcaagcggaacgggagtcgtacgaggctttcctccctcccttgcgcaagcagtac
gaggacgccgcgaaagcctacgacgagaagaatcaatcctatacccgcttgcgttcggag
cggaatctcctgctgggaggccagccagccgaccaggtggaacgtaccttccacgaacgg
gtggaagccttgaagagccatttgaagcagttgcaagagagtacgacgaggcacgccggc
gaggtggagcaataccgggggggtacggaacagatcaagaaggatctggcggagacttcc
ggtctcctttccgcacgccggcaggagctggataactggatggtcgcctatcaagagaac
tccgaggggaagacgctggaggaatctctgtcggaaatgacggcccaaaagtctgaatgt
agtttccgtctgcgtacgcacgaggagaataagcggaagatagccggcttccagcaagag
ctctcggagcggagggcgatgagcgagcgttgggcgaagctgaatgagttggcaggctcg
gcggatggcgccaagttccgtaggatcgcccaaggctacaccttggatgtcttgttgagt
tacgcgaatgtgcaattgcggcaactatcccggcgttaccggttggagcgtgtgccggat
accttggccttgcaggtgatcgaccaagatatgtgcgacgagatccgtaccgtgcatagc
ctttccggaggggaatctttcttggtctcgctggccttggcgttaggcttgtcctcgctc
tcctcgaaccggatgaaggttgagagcttgtttatcgatgagggcttcggctctttggat
gcggagacgttgcgggtcgctatggatgccttggagagcctgcgtacgcaagggcgcaag
atcggcgttatctcgcacgtacaggaaatgacggaacgtattcccgtgcagatccgggtg
aaccgggcgggaaacggacggagttatctggaagtcatatag
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