Parabacteroides distasonis: BDI_1936
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Entry
BDI_1936 CDS
T00549
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pdi
Parabacteroides distasonis
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdi03016
]
BDI_1936
Enzymes [BR:
pdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BDI_1936
Transfer RNA biogenesis [BR:
pdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BDI_1936
Prokaryotic type
BDI_1936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABR43671
UniProt:
A6LDA7
LinkDB
All DBs
Position
complement(2293988..2294746)
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AA seq
252 aa
AA seq
DB search
MRRYFIYLGYNGKNFRGWQIQPNGMTVQQSIEEALAILMRTPVPIVGAGRTDAGVHAHLM
IAHFDWEEPIGDLVFLAEKLNRLLPKDIAVYKIVPVVPEAHARFDATSRTYKYYVTTKKD
PFNHELVYKLPGRLDFEAMNEACKVLFDYIDFTSFSKLHTDVKTNNCHIQHAGWTQEGDI
WVFTIRADRFLRNMVRAIVGTLLEVGRGRLTIDGFRNVIEAKDRCKAGTSVPGHALFLVD
VTYPEELFPVED
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgagacgatattttatatatctgggatataacggaaagaattttcggggctggcagatc
cagccgaatggtatgacggtgcagcaatctatagaggaggccttggccatcttgatgcgt
acgcccgtgcctattgtgggggccggccgtaccgatgccggcgtacatgcccacttgatg
atcgcacattttgattgggaggaaccgatcggggatttggtattcctcgcggaaaaattg
aataggctcctgcccaaagatatcgccgtttataagatcgtgccggtcgtaccggaggcg
catgcccgcttcgacgctacctcgcgaacctataaatattatgttacgacaaagaaagac
ccgtttaatcacgagctggtttataagcttcccggtcgtttggatttcgaggcgatgaac
gaggcgtgtaaggtcttattcgattatatcgattttacgagtttcagtaagttgcatacg
gatgtaaagacgaataattgccatatccaacatgcgggttggacgcaagaaggggatatt
tgggtgtttacgatccgtgcagaccgtttccttcgtaatatggtgcgtgcgatcgttggt
actttattggaagtcggaagaggacgtttaacgatagacggcttccgaaacgtgattgag
gcaaaggatcgttgcaaggccggaacctccgtgccgggacacgccctgttcttggtagac
gtcacgtacccggaagaactctttccagtggaggattaa
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