Parabacteroides distasonis: BDI_2022
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Entry
BDI_2022 CDS
T00549
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdi
Parabacteroides distasonis
Pathway
pdi00300
Lysine biosynthesis
pdi00470
D-Amino acid metabolism
pdi01100
Metabolic pathways
pdi01110
Biosynthesis of secondary metabolites
pdi01120
Microbial metabolism in diverse environments
pdi01230
Biosynthesis of amino acids
Module
pdi_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pdi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BDI_2022
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDI_2022
Enzymes [BR:
pdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BDI_2022
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABR43755
UniProt:
A6LDJ1
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All DBs
Position
2387606..2388763
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AA seq
385 aa
AA seq
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MLKGTFPVEKFKQLSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSII
AANGLGADCVSGGEVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELG
IINELAAAKNKVASIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNV
KLIGIHSHIGSQITDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLS
IPAFDNYFAAIHKLLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGF
TELIRPAMYDAYHRIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSA
GAYGEVMASQYNCRHLPKAYYSDTI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaggaacatttcctgtagaaaagttcaagcagctttctacgcctttttattat
tatgatgtcaagctattgcaagacacattagacgtagtaaaaaccgaatccgggaaatat
ggttaccacgtgcattatgccgtgaaagcgaatgccaatccccgtatcctttccatcata
gcggcaaacggccttggcgcagactgcgtaagtggcggcgaggtacaggcagctttagat
gccggttttcctgccgataagattgtctttgccggtgttggcaaagcggattgggagatc
aacctaggactggacaatgatattttctgctttaacgtggaatctgccgttgagctggga
atcatcaatgagctggcggccgctaaaaataaagtagcctctatcgcccttcgtatcaac
ccggaagtggatgcccatacgcatgccaagatcacgacgggtatgaaagagaataaattc
ggtatcaaccttagccaattaggaggtgtactggataaattaaaggagatgaagaatgtg
aagttgatcggtatccatagccatatcggttcacagatcacggatatgtctagcttccgc
aatttggtaattcgtttcaacgagatacaggaagaactggaagctcatggggttacagtg
gagaacctaaacttcggaggtggattaggtatcgattactatcacccgaatcatttatcg
atcccggctttcgataactatttcgcggccattcataaactgcttcaagtacgtccgggt
caacaggtacattttgagccgggacgttcgatcgtcgctcaatgcggaacattaatctct
aaggtattatatgtcaaggaaggagagacgaagaaattcgctatccttgatgcaggtttc
acggaattgatccgcccggcgatgtacgacgcttatcaccgtatcgagaacatcagcagc
gatgaggcagtagagacttacgatgtagtgggccctatctgtgagtcatcggatgtattc
ggtaaggatgtagagttgaataaggctcatcgtggcgacttgatcgcccttcgttccgcc
ggcgcttatggcgaggtcatggcctcccaatacaactgccgccatttaccgaaagcctat
tattccgatacgatataa
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