Parabacteroides distasonis: BDI_2088
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Entry
BDI_2088 CDS
T00549
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pdi
Parabacteroides distasonis
Pathway
pdi03030
DNA replication
pdi03430
Mismatch repair
pdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BDI_2088
03430 Mismatch repair
BDI_2088
03440 Homologous recombination
BDI_2088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdi03032
]
BDI_2088
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_2088
Enzymes [BR:
pdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BDI_2088
DNA replication proteins [BR:
pdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BDI_2088
DNA repair and recombination proteins [BR:
pdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BDI_2088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
RCF1-5-like_lid
AAA_22
AAA_5
AAA_14
DNA_pol3_delta_C
AAA_19
AAA_30
AAA_assoc_2
Rad17
AAA_2
DUF6443
AAA_24
Mg_chelatase
AAA_16
QueC
Motif
Other DBs
NCBI-ProteinID:
ABR43819
UniProt:
A6LDQ5
LinkDB
All DBs
Position
complement(2470376..2472136)
Genome browser
AA seq
586 aa
AA seq
DB search
MDNYIVSARKYRPSTFRSVVGQKSLTTTLKNAIQSNKLAHAYLFCGPRGVGKTSCARIFA
KTINCLNPTADGEACNACESCRAFNEQRSYNIHELDAASNNSVDDIRTLIDQVRIPPPIG
KYKVFIIDEVHMLTTAAFNAFLKTLEEPPHHALFILATTEKHKVLPTILSRCQIYDFSRI
SIADMVEHLQYVSSQEGVTAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGNITYQAVI
DNLNVLDYEYYFRLTDAILSGNVRASLLILNEILGKGFDGQNIITGLAGHFRDLLVCRDE
STLVLFEVGASIRERYKEMAKHCPDQLLFKAIELANTCDLNYRASRNKRLLLELTLIQLC
QLTQVAVDDKKKALIEPIAGTNPSSQAVNSGQPQQPPQAPSVTAAAGAPQVMSTHMPSSV
PAPPPSTAPNPARKTARPMGISMKEIGVEKPKQQTVQQATTNVKEVVTPFDNDSLVREWD
NYAATIDKKVYLKNTMINCKPTLQENYYFEVAVHNPGQQEELINNAIHILPFLRQHLNNS
RIQMRVRIVEGNEKHLAYTSTEKLELLMKINPTLGRLRDEFNLTLD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggataattatattgtatcggcaagaaaatatcgcccgtccactttccggagtgtagta
gggcagaagtctcttaccactacgctgaaaaacgcgatacaaagtaacaaattagcgcat
gcttacctgttttgcggtcctcgtggagtaggaaagacctcgtgtgcccgtatctttgcg
aagacgatcaattgcttgaatccgacggcggatggcgaggcttgcaatgcgtgcgagtcg
tgccgggctttcaatgagcagcgttcttacaatatccatgaactggatgccgcctcgaat
aactcggtggacgatatccgtaccttgatcgaccaagtgcgtatcccgcctccaatcggt
aaatacaaagtcttcattattgacgaggtccatatgttgacaaccgccgctttcaacgca
ttcttgaagacattggaggaacctccgcatcatgctctctttatcttggctacgaccgag
aagcacaaggtgcttcccacgatcctttcccgttgtcagatctatgatttctcccgtata
tccatcgccgacatggtggagcatttgcaatatgtctcttcgcaagagggggtaactgcg
gaaccggaagccttgaacgtgatcgctcagaaggcggatggaggtatgcgcgacgctttg
tctatctttgaccaagtggtaagtttcacgaatggcaatatcacgtatcaagcggttatc
gataacttgaacgtgctggattatgagtattattttcgtctgacagatgcgatcttatcc
ggcaatgtgcgggcttctttattgatcttgaatgagatattaggcaaaggattcgacggg
cagaatatcataaccggtttggctgggcatttccgggacttattggtatgccgggatgag
tccaccttggtgctattcgaggtgggagcttctatacgggaacgatataaggagatggcg
aaacattgtccggatcaacttctgttcaaggcgatagagctagcgaatacgtgcgatttg
aattaccgtgccagccgcaataagcgtcttttattggaattgacgttgattcagctctgt
caattaacacaggtggccgtcgacgataaaaaaaaagcgttaattgagccgattgctggg
acgaatccgtcttctcaagcggtgaatagcgggcagccccaacagccgcctcaagctcct
tcagttacggcagcggccggtgctccacaagttatgagtacgcacatgccgagctcggtt
cctgcgccacctccgtctacagcgcctaatccggctcgtaaaacggctcgtccgatgggg
atctccatgaaggagatcggagtggagaagcctaagcaacaaaccgttcaacaagcgaca
acgaacgtaaaggaggtagtaactccctttgacaatgattccttggttcgtgaatgggat
aattacgccgcaacgattgacaagaaagtgtatcttaagaatacgatgatcaattgcaag
cctaccttgcaagagaattattatttcgaggtagctgtacataacccggggcagcaagag
gaattgatcaataatgcgatccatatcctgccatttctccgccagcatcttaataacagc
cgcatccagatgcgtgtccggatcgtagagggaaatgagaagcacttggcttatacatcc
acggagaagctagagctgctgatgaagataaatcctaccttgggtcgtttgagggatgag
tttaatttgacgttagattaa
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