Parabacteroides distasonis: BDI_2325
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Entry
BDI_2325 CDS
T00549
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdi
Parabacteroides distasonis
Pathway
pdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BDI_2325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdi03021
]
BDI_2325
Transcription machinery [BR:
pdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDI_2325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
HTH_24
DUF722
DUF6705
HTH_Tnp_4
HTH_11
HTH_28
HTH_23
HTH_40
UPF0122
AMP-binding_C_2
MarR
HTH_36
AvrB_AvrC
Motif
Other DBs
NCBI-ProteinID:
ABR44050
UniProt:
A6LED6
LinkDB
All DBs
Position
complement(2736243..2736836)
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AA seq
197 aa
AA seq
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MSFFQKSIRSDEDLLTSLRQGSEDAFTVIYERYHKLLYVLAYKYLKSTYSSEDAVQQVFL
KLWEARSLLMVNVNLRNYLYTMLKNHVLNEIRNNNSAVEKNYEIVQSAPEYEDELLIKIE
EQDMMSHFYQAIDHLPEQKRQVCLYKLKGNLSNQEIADKMNISVPTVKTHYAQAIKILRA
HFERLFLFLLYLWNSSY
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttttcagaaatccatacggagcgatgaagatctgctcacctcattgaggcag
gggagcgaggatgcgtttactgttatttatgagcggtatcataaattattgtatgtgttg
gcctataaatatttgaaaagtacatattcttcggaagatgccgtacagcaagtttttctg
aaattgtgggaggcacgttccctactgatggtgaacgtgaatttaaggaactatctctat
acaatgctaaagaatcacgtattaaatgagatccggaataataatagcgccgtagagaaa
aattatgagatcgtacaatcagcgccggaatatgaggatgaactgcttataaagatagag
gaacaagatatgatgtctcatttttaccaagcgatcgatcatttgccggagcagaaacgc
caagtctgtctgtataagctgaaagggaatctatctaatcaagaaatcgccgataagatg
aatatctcggtccccacggtaaaaacacattatgcgcaagcgataaaaatactgcgggca
catttcgagagactatttttatttcttttatatttgtggaactcatcctattga
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