Parabacteroides distasonis: BDI_2410
Help
Entry
BDI_2410 CDS
T00549
Name
(GenBank) putative beta-agarase precursor
Organism
pdi
Parabacteroides distasonis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flg_new_2
Big_2
HL_N-beta
Motif
Other DBs
NCBI-ProteinID:
ABR44135
UniProt:
A6LEM1
LinkDB
All DBs
Position
complement(2821951..2827296)
Genome browser
AA seq
1781 aa
AA seq
DB search
MKKSILAIFLAVIAMAQVHAQDSDLRSAPDLPTFKVTLNYSSANTDQGTITSTVATGSKV
AYNSKPVFTITAKPGYVLSDITMNTATIGTLPSGTFQNDNTTTYSYTSTALTGSTEIKAV
FKAKEQVTVTISPEYATLDEIRAKVNLPKVTFDPVITGYKVQYREDGSAALTDELPEKAG
LYYVVVTKSETDTQVAINKEILFKVQPSHTLSYSFEEAQGSVTASMDGSIIASGDEIVYN
KPAVLKITSKPGYVLSRLTVDNNEVTLPKGTFNSSTNETSYVDYTTSALTASTVIDVRFA
AKKTVSVTANPLSATKDEVLAGKNLPVITFTPNTIAGQKVQYKNASGALSDKLPAADGVY
TIVATSPETAEYAALKDENMKFTVSKANVLNYNVETAGQGTVTAKMGSTDMASGSEIING
QPAVFTIIANPGFLLNKIVVNGTAVSALPKGALNKDNTISYTYTTASLTASTTLSVGFAA
KKTISVSVTGSSATKDEIVAGKNLPVIKFTPEIAGQAVRYRAADGSETSTLPQIVGAYKI
VLFSPETMEYAALEDSSKTFTIRNANTLAYAVDGGQGTVTAKMNNKDIMSGGEIAYGKSV
IFSIVSNANYRLGAIKQASSDVDISKIKGTYANGNTSYTYTTPNLMSGDSYTFAFVSKDT
VRFVANNLVQTVGSIKPVTVTSAVGDIKIEYQLSGTAWVTTLPSTLAVGSYKARLSRAED
LTYRSLSDTVTLVVESKKEVESLVLPTPGRIEEGQALSACTLIDGTSSGSFIWKTPNEIA
SPDKKKYDLIFEPNDPVLYAAKDTFITLNVIPVYSMNVTAGNFGTVILEGRTANDKYARG
SVLKATAVADKNYRFAGWSDGNTSATRELQANTNLDIVARFDSIVYGVTFTNPMNGSLKV
FANGVEVKNGAEFLQGTLLTITATPDPGYMVQSVKVNGALVNNGSYTLIQAADISADFLQ
KEPDKHLVKVGELKNGSVNLIEVDTKAPVTPGEAISEGVKVKVIGNADYGYELASVKVEG
ANYNEADGSFMVGTGDVTVNASFQLVKYQITSALNIPNAGKVVLKDKAGKEVASGSKVPY
MTQLTASVETETGYRFMNMMVNSSEIKDGDVFTVSGPMVVTANYVEKKDLASLIDKTTQT
VVYNKQYRNFEVKITGYSGLDFKVAYSRSGVEMTENPKSAGTYKVRITRGEDDLFKAVDV
TAELIIKKAGMALLKEPTIEGEDYSKIDAKLTQDFEDVEWNPSTQKSALRANVTGSPTKD
QVNILRFTPLDKSNYESVDYSMPVGEVKTFSLSASNTEVTNGGLVIRDYSKIPENTVLKL
RAVAPSENQRFDSWSDNVSSADRKNPEITVTLAADATYTPNFVDKPKIAANPFDLEFVYD
GSVRLVELKDILSGSYPTDVNIKYSNTDGSVATPLNAGTYLVTVTRTGDENWRSFEATKK
LVIKKAKVVEVVAPTASTITEGQSLSEFLLSGGVAKGADGTTISGKFEWADASAILKPGD
SQKKEVIFTSYDPNYEDATTNAEVTVKSSDALVVTFAQPENGSLKVYMLKGEGEKTEITS
GTAVAKATKLTIETEANPDYELAVIQIGEEKYTTSPVEIEVDKSLAIIAEFKPVSTPPGT
DVAVTGVSLNITSKALAVGESFALQEKVTPNNATMKTVSWSSSDETVATVDADGVVTALK
IGTCKITVATDDGNKTASCVVTVSGTVGIEQIIDDHQIYCERGAITVHPARPISIRIIAV
TGVSLYGDSIIGPTRIPVSTGIYLIEINENGKHITVKVNVR
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagtatattagcgatattccttgctgtcattgcgatggcacaggtacatgcg
caagattcagatttacgttccgccccggatcttccgacgttcaaggtgacattgaattat
agctcggcgaatacggatcaaggaaccataaccagtacggtagccacaggttccaaggtg
gcatataatagtaaacccgttttcacgatcacggcgaagcccggatatgtcctgtcggat
ataacgatgaatacggctactattggcacgttgccgagcggtacttttcaaaatgataat
acgaccacttattcctatacttccaccgctttaaccggtagtacggaaatcaaggcggtg
ttcaaggcgaaagagcaggtgacggtcacgatctctcctgagtatgccaccttggatgag
ataagggcgaaggtgaatttgcccaaggttacttttgacccggttattacggggtataaa
gtacaatacagggaggatggctctgctgctttgacggatgagctacccgaaaaggctgga
ctttattatgttgtcgtaaccaagtcggagactgatacgcaagtcgccataaacaaggag
attctattcaaggtacaaccgtcccatacgctttcctactcgtttgaggaggcgcaagga
tctgtaaccgcttctatggatggctccattatcgccagtggtgatgagatcgtttataat
aagccagccgtattgaagattacctccaagcccggttatgtgttgagcagacttaccgta
gataataatgaggtgactttgccgaaaggaacttttaattcttctacgaatgagacttcc
tatgtggattatacgacatcggcgttgaccgcttctacggttattgacgtgcgatttgcc
gcgaagaaaaccgtatctgtaacagccaatccattatctgccacgaaggatgaggttttg
gctggtaagaatcttccggttatcacatttacccccaatacgatagcggggcagaaggtt
caatataagaacgcttccggagctttatccgataaacttcctgcggcggatggtgtttac
acgatcgtcgcgaccagtcccgagactgcggaatatgccgccttgaaggatgagaacatg
aagttcacggtatctaaagcgaatgtattaaattataacgtggaaacggccggacaaggt
acggttaccgccaagatgggctctacggacatggcaagcggtagcgagatcattaacggc
caacctgccgtatttacaattatcgctaaccccggatttctattgaataagattgttgtg
aatggaactgcggtatcagccttgccaaaaggcgcgcttaataaggataacaccatctct
tatacctatacgaccgcctcgttaaccgcctctacgaccttatcggtaggtttcgccgcg
aagaaaacgatttccgtgagtgtaacaggttcttcggcgacaaaagacgagatcgtggcc
gggaagaatttgccggttattaagtttacgccggaaatagcgggacaagcggttcgatat
cgtgcggccgatggttcggagacttccacattaccgcagatagtcggagcttataagatc
gtcttatttagtccggagaccatggagtatgccgcgttagaggattcctctaaaacgttt
acgatccgtaatgccaataccttggcttacgctgtcgatggtggacagggtacggttacc
gccaagatgaacaacaaggacatcatgagcggtggtgagatcgcttacggtaagtccgtc
attttctcgatcgtatcgaatgccaactataggctaggggctattaagcaagcctcttcg
gacgtggatatctcgaagatcaagggaacgtatgctaatggaaatacctcttacacgtac
acgactcctaatctgatgagtggcgatagctatacctttgcgttcgtctccaaggatacg
gtgaggttcgtggctaacaaccttgtccagacggtcggctccatcaagccggtcacggta
acaagcgctgtcggggacatcaagatcgaatatcaattgagcggtacggcttgggttacg
acattgccttccacgctggctgtgggttcttataaggctcgtttgagccgtgcggaggac
ttgacataccgtagcctctctgatacggttacgttagtggtggagagcaagaaagaggtg
gagagtttggtgttacctactccgggtcgtattgaggaaggacaggctttatcggcgtgt
accttgatcgatggaacttcttccggatcatttatctggaaaactccgaacgagatcgct
tctccggataagaaaaagtacgacttgatattcgaaccgaatgatcctgttctctatgcg
gctaaagatacgtttataaccttgaacgtaattcctgtttattctatgaatgttaccgcc
ggtaatttcggtactgtcatcttggaggggcgtaccgcaaatgataaatacgcgagaggc
tcggttttgaaagcgacagccgtcgcggataagaattaccggtttgccggttggagtgat
gggaatacatcggctacacgggagttgcaagcgaatacgaacttggatatcgtagcccgt
ttcgattcgatcgtttatggcgtgacgtttacgaatccgatgaatggttccttgaaggtc
ttcgcgaatggcgtggaggtaaagaatggtgctgagtttttgcagggaaccttattgact
atcacggcgactccggatccgggctatatggttcagtccgtgaaggtgaacggggctttg
gtgaataacggttcttatactttgatacaagccgctgatatatcggccgatttccttcaa
aaagaaccggataaacatttggtaaaggttggggagttgaagaatggtagcgtgaatctg
atcgaggtggatacgaaggcacccgttactcccggtgaggctatctctgaaggtgtgaaa
gtgaaggtgataggaaatgcggattatggctatgagctggcatccgtgaaagtggaaggc
gcgaattataatgaggctgatggctcatttatggttgggaccggagatgttacggtgaac
gcgagtttccaattggtgaaatatcaaataacctcggcgttgaatatccccaatgcgggt
aaagtcgtattgaaagataaggccggtaaagaggtggcttctggttctaaggttccttat
atgactcaactgaccgcttctgttgagacggaaacgggatatcgttttatgaatatgatg
gtgaactcttccgagatcaaggatggagacgtattcaccgtttctggccctatggttgtt
accgctaattatgtggagaagaaagatttggcttcgctgattgataagacgacgcaaacg
gtagtctataataagcaataccggaatttcgaggttaagattacgggctattccggtttg
gactttaaggtcgcatattcccggagtggggtagaaatgacagagaatcctaaatcggcc
ggaacttataaagttcggattacccgtggcgaggatgatttatttaaagccgtggatgta
actgccgagctgattatcaagaaggctggtatggcattgctgaaagaaccgactatagaa
ggggaggattattcaaagattgacgctaaacttactcaagacttcgaggatgtggaatgg
aatccttctacacaaaaatcggcgcttcgtgcgaacgtgactggaagcccgacaaaggat
caggtaaatattctgcgctttaccccacttgacaagagtaattatgaatcggtagattat
tcaatgccggttggtgaagtaaaaacgttttctttaagtgcctcaaatacggaggttacg
aatggaggcttggttattcgcgattattctaaaattccggagaatacggttttaaagttg
cgagcggtagctcctagcgagaatcagcgttttgattcttggagtgataatgtctcaagc
gccgatagaaagaacccagagataacggttactttggcggctgatgcgacatacaccccg
aattttgtggataaacctaaaatagcggcgaacccttttgacttggagtttgtttatgat
ggttccgtaaggcttgtggaattgaaagacattttgagcggtagttatccgacagatgta
aatattaaatattcaaatacggatggatcggttgctaccccattgaacgcaggtacttat
cttgtgactgtaacacgtaccggggacgagaactggcgatctttcgaggcaaccaagaaa
ttagtgataaagaaagcgaaggtcgtagaggtagtagctcctaccgcatctacgatcacg
gaaggtcagtccttgtcggaattcctattatccggtggtgttgcgaaaggtgccgatgga
actaccatatccggtaaatttgaatgggctgatgcgtcagctatattgaaacccggcgat
agccagaaaaaggaagtgatcttcacgtcgtatgatccgaattatgaggatgcgactacg
aatgcggaggttacggtgaaaagttcggatgcgttagttgtcacgttcgctcaaccggaa
aatggttctttgaaagtctatatgttgaaaggtgagggcgagaagaccgagataacgagt
ggaaccgctgtggcgaaagcgactaagctaaccattgagacagaagccaatccggattat
gaattggccgttattcaaataggcgaagagaagtatacgacttcgcctgtagagattgaa
gtcgataagtccttggctattatagcagagttcaagccggtttctacacctccgggaaca
gatgtggctgttacgggagtttctttgaatatcacgtccaaggcattggccgtaggtgaa
tcttttgccttgcaagagaaagttacccctaataacgccactatgaaaaccgtctcttgg
agtagcagcgacgagacggtggctactgttgacgcggatggtgtcgttaccgcattgaag
atcggtacttgcaagattaccgtggctaccgatgatggaaacaagacggcgtcttgtgtg
gtaactgtctccggtacggtaggtatcgagcaaatcatcgacgatcatcaaatctattgc
gagcgaggtgcgataaccgttcatccggcccgtccaatctcgatccgtatcatagcggtg
actggagttagcctgtatggcgactcaattatcggacctacccgcatcccggtatcgaca
ggaatctatctgatagagatcaacgagaatggcaagcatataacagtgaaagtaaacgtt
cgctaa
DBGET
integrated database retrieval system
