Parabacteroides distasonis: BDI_2760
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Entry
BDI_2760 CDS
T00549
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdi
Parabacteroides distasonis
Pathway
pdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDI_2760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdi03019
]
BDI_2760
03016 Transfer RNA biogenesis [BR:
pdi03016
]
BDI_2760
Enzymes [BR:
pdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BDI_2760
Messenger RNA biogenesis [BR:
pdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BDI_2760
Transfer RNA biogenesis [BR:
pdi03016
]
Prokaryotic type
tRNA degradation factors
BDI_2760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
DUF7071
RNase_II_C_S1
GET4
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ABR44473
UniProt:
A6LFK9
LinkDB
All DBs
Position
3287851..3290091
Genome browser
AA seq
746 aa
AA seq
DB search
MLNPINKTIELGDGRTITIETGKLAKQADGAVTVRMNNTVLLATVCAAKDANPGVDFMPL
QVEYKEKYSAFGRFPGGFTKREGKASDYEILTSRLVDRALRPLFPDNYHAEVYVNIILFS
ADGEDLPDALAGLAASAALAVSDIPFNGPISEVRVARTDGKYIVNPTSAELEKADIDIMV
AATIDNIMMVEGEMNEVQESEMLEAIKVAHEAIKVQCKAQLELSEACGKLVKREYCHEVN
DDELRKDVHDKCYAKAYAVATSGSGKHERSEAFEKIVEEYKAQFSEEELTDEKLEMIGRY
YHDVEKEAMRRAILDEGKRLDGRKTTEIRPIWIETDCLPGPHGSAIFTRGETQSLSTVTL
GTKSDEKMIDDVLNHGYERFLLHYNFPPFSTGEAKATRGVGRREIGHGNLAHRALKRMIP
DNYPYVVRVISDILESNGSSSMATVCAGTLALRDAGVPMKKPVSGIAMGLISENKGTNYA
ILSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILENALAQAKEGRMHILGK
ILEAQPEAREDLKPHAPRIETMIIGKEFIGAVIGPGGKIIQGIQEKTGATVSIDEVDGVG
KIEISGTNKATIDAAVKAIKAIVAVPEIGEVYEGKISSIMPYGAFVEFMPGKDGLLHISE
IDWKRLETVEQAGLKEGDTVSVKLVDIDPKTGKFKLSRKVLLPKPEGYEERPPRPERGER
GPRQDRGDRGPRQDRGDRGPRREYRD
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatccaattaacaagacgatcgagttaggtgatggaagaaccattaccatcgaa
accgggaaattggccaaacaggcggacggagcggttaccgttcgtatgaacaacaccgtg
ttgctcgccactgtttgtgccgctaaagacgcgaacccgggtgttgacttcatgccgttg
caagtagaatacaaagagaaatactccgcttttggacgtttccccggaggttttacaaaa
agagaaggaaaagcttctgattatgaaatcctcacatctcgtttagtagaccgtgcgttg
cgtcctcttttcccagacaactaccacgctgaggtatatgtaaatattatattgttctcc
gctgatggcgaagatttgccggacgcattagcaggtttggccgcttccgccgctttggca
gtttctgatattccttttaacggaccgatctctgaggttcgcgtagctcgtacggatgga
aaatacatcgtcaacccaacttccgcagaattggagaaagctgatatcgacatcatggtt
gccgctaccatagacaacatcatgatggttgagggtgaaatgaacgaggttcaggaatct
gagatgcttgaggctatcaaggtcgctcacgaggctatcaaggtacaatgcaaggctcaa
ttggaattatccgaggcttgcggcaaattggtaaaacgtgaatattgccacgaggtaaac
gatgacgagttgcgcaaggacgtacacgacaaatgttacgccaaggcttacgccgtagcc
acatctggtagcggcaagcacgaacgcagcgaggcattcgagaaaatcgtagaagaatac
aaggctcaattctccgaggaggagttgacggacgagaaactggaaatgatcggtcgctac
tatcacgatgtagagaaagaggctatgcgccgtgccatccttgatgagggtaagcgtttg
gatggtcgtaagactaccgagatccgtccgatctggatcgagacagattgcctgccgggt
cctcacggttccgctatctttacacgtggagagacacagtctttatctacggtaacttta
ggtacgaagtctgatgagaaaatgatagacgacgtattgaaccatggatacgagcgtttc
cttttacattataacttccccccattctccacaggcgaggccaaagcaacacgtggcgta
ggccgtcgtgagatcggacacggcaacttggctcaccgtgcgctgaaacgtatgatcccg
gacaactatccgtatgtagtacgtgtaatctccgatatcttggagtctaacggttcttct
tctatggctacggtttgcgccggtaccttggcgttgagagacgcaggtgtcccgatgaag
aaaccggtatccggtatcgctatgggattgatctccgagaacaagggtacgaactacgcg
atcttgtctgatatcttaggcgacgaggatcacttgggtgatatggacttcaaggtaacg
ggtacgaaagacggtatcacggcaactcagatggatatcaaggtagacggtttgtcttac
gagatccttgagaatgctttggctcaagctaaagagggtcgtatgcatatcttgggcaag
atattggaggctcaaccggaagctcgtgaggatttgaaacctcatgcacctcgtatcgag
acgatgattatcggtaaggaattcatcggtgcggtaatcggcccgggcggtaagatcatc
caaggtatccaagagaaaacgggagctacggtatctatcgatgaggtagacggcgtagga
aagatcgagatctccggcacgaataaggctacgatcgacgcggctgtcaaggcgatcaag
gctatcgtcgctgttcctgagatcggagaggtttatgaaggaaagatttcctctatcatg
ccttatggtgcattcgttgagttcatgccgggtaaggatggtttgcttcacatttccgag
atcgattggaaacgtctggagaccgttgagcaagccggcttgaaggaaggcgatacggtt
tctgtcaagttggttgatatcgatccgaagacaggcaagttcaaactttcccgcaaggta
ttgcttccgaaaccggaaggttacgaggaacgtccgccaagaccagaaagaggtgagcgt
ggacctcgccaagatcgtggagaccgtggtcctcgtcaggatcgtggtgatcgcggacct
cgcagggagtacagagactaa
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