KEGG   Parabacteroides distasonis: BDI_2856
Entry
BDI_2856          CDS       T00549                                 
Name
(GenBank) putative ECF-type sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdi  Parabacteroides distasonis
Pathway
pdi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pdi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BDI_2856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdi03021]
    BDI_2856
Transcription machinery [BR:pdi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BDI_2856
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 GerE DUF2524 PRD
Other DBs
NCBI-ProteinID: ABR44569
UniProt: A6LFV5
LinkDB
Position
3407710..3408273
AA seq 187 aa
MEKHSKEIMQWVCEIALSDSQTAFKSLYLAYFQRLMRFTSLYVPSSVEAEEIVSDTFLSL
WNNRKSLPEISNFDSYIYGIARHKAISLYRTQHMEKVQIDENTIDLFAHTDTTPEEELIS
KECIDHLNEAINTLPDKCKMAFKLIREDKMKYKDAANILEISVKTLEAHIATAVRKLRES
LAKEIND
NT seq 564 nt   +upstreamnt  +downstreamnt
ttggaaaaacactccaaagaaataatgcaatgggtctgtgaaatcgcactatccgattct
caaactgcttttaaatcgctttatttagcctattttcagaggctaatgcggtttacatcc
ctttatgtgccttcctctgtagaagctgaggaaattgtctctgatacatttctaagtctt
tggaataatagaaagtcattaccggagatctctaacttcgattcttatatctatggcata
gcccgccacaaagccatcagcctataccggacacaacatatggagaaagtccagatcgat
gagaatacgatcgatttattcgcacataccgatactacgcccgaggaagaacttatttct
aaagaatgcatcgatcatttaaatgaggcgatcaatacgctcccggataaatgcaagatg
gcttttaaactgatccgtgaagataagatgaaatataaggatgcggcaaatatcctagaa
atatcagtaaagacattagaagcccacatcgccacggcagtacggaaactacgggaatct
ctagctaaagaaataaacgactaa

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