Parabacteroides distasonis: BDI_2856
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Entry
BDI_2856 CDS
T00549
Name
(GenBank) putative ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdi
Parabacteroides distasonis
Pathway
pdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BDI_2856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdi03021
]
BDI_2856
Transcription machinery [BR:
pdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDI_2856
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
DUF2524
PRD
Motif
Other DBs
NCBI-ProteinID:
ABR44569
UniProt:
A6LFV5
LinkDB
All DBs
Position
3407710..3408273
Genome browser
AA seq
187 aa
AA seq
DB search
MEKHSKEIMQWVCEIALSDSQTAFKSLYLAYFQRLMRFTSLYVPSSVEAEEIVSDTFLSL
WNNRKSLPEISNFDSYIYGIARHKAISLYRTQHMEKVQIDENTIDLFAHTDTTPEEELIS
KECIDHLNEAINTLPDKCKMAFKLIREDKMKYKDAANILEISVKTLEAHIATAVRKLRES
LAKEIND
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaacactccaaagaaataatgcaatgggtctgtgaaatcgcactatccgattct
caaactgcttttaaatcgctttatttagcctattttcagaggctaatgcggtttacatcc
ctttatgtgccttcctctgtagaagctgaggaaattgtctctgatacatttctaagtctt
tggaataatagaaagtcattaccggagatctctaacttcgattcttatatctatggcata
gcccgccacaaagccatcagcctataccggacacaacatatggagaaagtccagatcgat
gagaatacgatcgatttattcgcacataccgatactacgcccgaggaagaacttatttct
aaagaatgcatcgatcatttaaatgaggcgatcaatacgctcccggataaatgcaagatg
gcttttaaactgatccgtgaagataagatgaaatataaggatgcggcaaatatcctagaa
atatcagtaaagacattagaagcccacatcgccacggcagtacggaaactacgggaatct
ctagctaaagaaataaacgactaa
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