Parabacteroides distasonis: BDI_3340
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Entry
BDI_3340 CDS
T00549
Name
(GenBank) putative ECF-type RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdi
Parabacteroides distasonis
Pathway
pdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BDI_3340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdi03021
]
BDI_3340
Transcription machinery [BR:
pdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDI_3340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_40
GerE
GPR149_M
DUF8427
MOLO1
MATCAP
Herpes_U47
HTH_10
ViaA_N
DUF3562
Tnp_IS481_C
HTH_24
MIT_ATG38
Motif
Other DBs
NCBI-ProteinID:
ABR45044
UniProt:
A6LH80
LinkDB
All DBs
Position
complement(4048880..4049425)
Genome browser
AA seq
181 aa
AA seq
DB search
MKGDDFNSIYERNYRRSFLFTKSYVHDDMAAEDIVAESLVKYWRLSLSQEAETSETLLLT
ILKNKALDYLRHKVIHESAIENIMELNDRELNIRISTLEACDPEEIFSHEIQTIIHNTLQ
SLPEQTRRIFEMSRFENKTVKEIAEETNITAKGVEYHITKALKVLRINLKDYLPLFYFLF
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagatgatttcaatagtatctatgaacgaaattaccgacggtcatttctgttt
acaaaatcatatgtacacgacgatatggcggcagaagatatcgtggcagaatctctcgtg
aaatattggagattatccctatcacaagaggcagagacctcagaaactcttctgctaacc
atattaaaaaacaaagccttagattatttacgacataaagtaatccacgaatccgccatt
gaaaacatcatggaacttaatgatcgtgaactcaatattcgtatatcgacacttgaagca
tgtgatccagaagaaatattctctcacgaaatacaaaccatcatacacaatacactacaa
tcattgcccgagcaaacccgccggatattcgagatgagtcgtttcgagaataaaaccgtg
aaagaaatagcggaagagaccaacattactgcaaaaggagtagaatatcatataactaag
gcattaaaggtattacgtatcaacctaaaagattacctgcccttattttattttcttttt
tcttaa
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integrated database retrieval system
