Parabacteroides distasonis: BDI_3384
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Entry
BDI_3384 CDS
T00549
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pdi
Parabacteroides distasonis
Pathway
pdi00300
Lysine biosynthesis
pdi00470
D-Amino acid metabolism
pdi00550
Peptidoglycan biosynthesis
pdi01100
Metabolic pathways
pdi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BDI_3384
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDI_3384
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDI_3384
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BDI_3384
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdi01011
]
BDI_3384
Enzymes [BR:
pdi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
BDI_3384
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BDI_3384
Peptidoglycan biosynthesis and degradation proteins [BR:
pdi01011
]
Precursor biosynthesis
Amino acid ligase
BDI_3384
Racemase
BDI_3384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
ABR45087
UniProt:
A6LHC3
LinkDB
All DBs
Position
complement(4108472..4110937)
Genome browser
AA seq
821 aa
AA seq
DB search
MEYAIKEIARVIGAKTNQLLDDTVSLLLTDSRRLSFPEKSLFFALKTKTNDGHRYIQELY
KLRVRNFVVSDMLPEFESMKDANFLIVKDTLRALQKLATHHRKQFNIPVIGITGSNGKTI
VKEFLYQLLHNEFNIVRSPRSYNSQLGVPLSVWQMSEKNTLGIFEAGISQPDEMERLQPI
IAPTIGIITNIGEAHQENFLSSNQKCMEKLTLFNDCEAIIYDGDDLFIANCIESACLSHK
AIAWSRTDSEAPLFIESIDKKEFETIIHCTLLGFNRVVTIPFTDDASIENVIHCMAVMLY
LKPTSVNDVTKFLHLEPVAMRLDVKQGINNCLLINDTYNSDINSLDIALDFQQSRRVGKQ
LKSTLILSDILQSGTLPKSLYKKVADLVRRKKIDRIIGIGRDLKEYASVFEIEKEFYTTT
EEFIKSPSFKKFKDELILIKGSRHFHFEQISELLEKKVHETILEVNLDAIVHNFNQYRSK
LKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADEGAELRKEGISIPIIVMNP
EFSSFNVLFENHLEPEVYSFRLLDAMIRETERRGITSYPIHIKIDTGMHRLGFQPEDVPA
ICERLRAQSGVIARSVFSHLAGSDSYVFDDFTHQQLDKFTKAAGELESGLEYKVIKHILN
SAGIERFAAYQMDMVRLGIGLYGVSASGQKGLRNVSTLKTTILQIQNVPAGDSIGYSRMS
YVKRDSRIAIIPIGYADGLDRHFSNGGGEVLINGQRCPIIGNICMDACMIDVTDIHAQEG
DAVIIFGDELPVSELSDKLKTIPYEILTSISPRVKRVYFRE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgcaattaaagaaatagcaagagttatcggtgctaaaacaaaccaattgctt
gacgatacggtcagtttattgttgactgacagccgtcgtctctccttcccggaaaaaagc
ctcttcttcgccttgaaaaccaagacgaacgacggacatagatatatacaggaactctat
aaacttcgtgttcgcaacttcgtggtaagcgatatgctaccggagttcgagagcatgaag
gatgcgaacttcctgatcgtaaaagatacgttacgggctttacaaaagctggccacccac
cacaggaagcaattcaatatccccgtgatcggcatcaccggtagcaacggaaagacgatc
gtaaaggaattcctctatcaactgttgcataacgagttcaacatcgtacgttcgccccgg
agctacaactcccagttgggggttcctctctcggtatggcagatgagcgagaaaaataca
ctgggcatcttcgaggccggtatctcacaaccggacgagatggaacgcctgcaacccatt
atcgcccccacgatcggtatcatcacgaatatcggggaggctcatcaagagaatttcctc
tcctccaatcagaaatgtatggagaagctgacgcttttcaatgattgcgaagccattatt
tatgatggggatgatttatttatcgccaattgtatcgaatcggcttgcctttcccataaa
gcgatcgcatggagccgtacggactccgaggctcctttgtttatcgagtctatcgataag
aaagagtttgagacgatcattcactgtactttactgggcttcaaccgggtcgttaccatt
ccgttcacggacgacgcttctatcgagaacgtgatccattgtatggcggttatgctttac
ctaaaacccaccagcgtaaacgacgtaacaaaattcttgcatcttgagccggtggctatg
cgattggacgtaaagcaaggtatcaacaattgcctgttgataaatgatacctataactcg
gatatcaactccttggatatcgcgctcgatttccaacaaagccgccgggtaggcaagcaa
ttaaagagcactttaatcctctccgatatccttcaatcgggcaccttgccgaaatctcta
tataagaaggtcgccgatttggttcgccgtaagaagatagatcgtatcatcggtatcggc
cgcgacttaaaggaatatgcttccgtcttcgagatcgagaaggagttttacacgaccacc
gaggaatttatcaagtctccttccttcaagaaattcaaggatgagttgatcttgattaaa
ggttcccgccatttccatttcgagcagatctccgagttgttggagaagaaagtgcatgag
acgatcctagaggtaaatctggacgcgatcgtacacaacttcaatcagtatcgttccaag
ctaaagccggagactaagatggtttgtatggtaaaagcttttggttatggagccggctct
tacgagttggcgaagacccttcaagaacatcgttgcgactatctggccgtggcggtagcc
gacgagggagccgaattgcgtaaagaaggcatctcgatccccattatcgtcatgaatccg
gaattcagcagtttcaatgtcttgttcgagaaccatctggaaccggaagtctatagcttc
cgcctattggatgccatgatccgggagaccgagcgcagagggatcacctcttaccctatc
catatcaagatcgataccggcatgcatcgcctagggtttcaaccggaggatgtcccggcg
atctgtgaacgcttgagagcgcaatccggggttatcgcccgttcggtcttctctcattta
gccggaagcgactcgtacgtcttcgatgattttacccatcaacaattggataaattcacc
aaagccgcaggggaactagaaagcgggttagagtataaggtaatcaaacatatcctaaac
tccgcgggaatcgagcgtttcgccgcttatcaaatggatatggtacgtttaggtatcggt
ttatatggagtaagcgcatccggacaaaaaggcttacggaatgtcagcaccttgaagaca
acgatcttacaaatacaaaacgtacccgcaggggattcgatcggttatagccgtatgagt
tatgtgaaacgtgattcccggatcgctatcatcccgatcggatacgccgacggactggat
cgccacttcagcaacggaggtggggaggtcttgatcaatggacaacgctgtccgattatc
ggcaacatctgcatggacgcttgcatgatcgatgtcaccgacatccatgcgcaagaaggc
gacgccgtaattattttcggcgacgaactaccggtgagcgaactttcggataaactgaaa
acaatcccttatgagatattaacctctatctcgcctcgggtaaagagggtttatttccgg
gaataa
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