Parabacteroides distasonis: BDI_3453
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Entry
BDI_3453 CDS
T00549
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdi
Parabacteroides distasonis
Pathway
pdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BDI_3453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdi03021
]
BDI_3453
Transcription machinery [BR:
pdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDI_3453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
HTH_11
GerE
HTH_40
HTH_24
Sigma70_ECF
DUF1441
HTH_Mga
DUF2774
HTH_28
TnsD
Sigma70_r3
HTH_38
DUF7216
HTH_5
HTH_VMAP-M9
DUF7123
GP68
Motif
Other DBs
NCBI-ProteinID:
ABR45155
UniProt:
A6LHJ1
LinkDB
All DBs
Position
4209381..4209893
Genome browser
AA seq
170 aa
AA seq
DB search
MAAITTQEFEHHFKSLYKPLCLFALRYTDQVDDAEDIVQQAFADVWDKNRAGNVIGNLKA
YLYQAVRNRSLSFTSQPVNAEATEQLPDVEDTSEEEDILRSERDARLWDAIDRLPPERKK
IFLLSKRDGLKYQEIAEELNLSVKTVENQMSKALKALRETAIRVYMFFFG
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggctgctattaccacccaagaatttgaacatcatttcaagagtttatataagcccttg
tgtttgtttgcgcttcgttataccgatcaggtggacgatgccgaggatatcgtgcaacag
gctttcgcggatgtatgggataagaaccgggctggtaatgtgatcgggaatctcaaggct
tatttatatcaagcggtgaggaaccgttctctttcatttacctcacaacccgtaaacgct
gaggccaccgagcagttacccgacgtagaagatacctcggaagaggaagacatcctgcga
tcggagcgtgacgctcgcctgtgggacgctatcgatcggttacctcccgaacggaagaag
attttcttgttatccaaacgggatggcttgaaataccaagagattgcggaggaattgaat
ttatcggtaaaaacggttgagaaccagatgagcaaggcattgaaagctttgcgagagacc
gctatccgtgtttatatgttctttttcggataa
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