Parabacteroides distasonis: BDI_3550
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Entry
BDI_3550 CDS
T00549
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pdi
Parabacteroides distasonis
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdi03032
]
BDI_3550
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_3550
Enzymes [BR:
pdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BDI_3550
DNA replication proteins [BR:
pdi03032
]
Prokaryotic type
DNA Topoisomerases
BDI_3550
DNA repair and recombination proteins [BR:
pdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BDI_3550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABR45251
UniProt:
A6LHT7
LinkDB
All DBs
Position
complement(4346646..4348601)
Genome browser
AA seq
651 aa
AA seq
DB search
MSEEIKNTSTEYSADSIQVLEGLEAVRKRPSMYIGDTSEKGLHHLVYEVVDNSIDEALAG
YCTYIDVVINEDNSITVTDDGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGTYKVSGG
LHGVGVSCVNALSTYLKAEVRRNGKVHMQEFSCGKPLHDVQVIDNTDKTGTTISFKPDGS
IFTVTEYKYDILATRLRELAFLNAGITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYI
DRSKEKLIPDVIHIVTEKQGIPVEVALTYNTSYNESVFSYVNDINTIEGGTHLAGFRRGL
TRTLKKYAEDSKLLEKAKVEIQGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAV
DMAIGEALGYYLEEHPKEAKIIVDKVILAAQARHAARKARELVQRKSPLTGGGLPGKLAD
CSSKDASICELFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQN
IYRAMGVTVGTEDDPKALNMEKLRYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENG
YVYLATPPLYLCKKGKVEEYCWTEQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWD
TTMNPENRTLKQITIDNAAEADQIFAMLMGEDVGPRREFIEENATYANIDA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaattaagaatacttctacagagtactccgcagatagtattcaagtactt
gaagggttagaggcagtacgaaaaaggccatccatgtatattggcgataccagcgagaaa
ggtctccatcacttagtgtatgaggtcgtagataactccatagacgaagcgctagccgga
tattgtacatacatcgacgtggtaatcaatgaggacaactcgatcacggttaccgacgac
ggccgtggtatccccgtggatattcatgagaaagaaggtaaatcagctttggaggtagta
ttgacggtgctgcacgccggcggtaagttcgacaagggaacctataaagtatccggtggt
ttgcacggtgtgggtgtatcttgcgtaaacgccctctctacttatctgaaagcggaagtt
cgcaggaacggtaaagtacatatgcaggagttctcttgcggaaagccgttgcacgacgta
caggttatcgataatacggataaaacaggtactacgatctctttcaagccggacggttct
atctttacggtcacggaatacaagtatgatatcttggctacccgtttgcgtgaattagcg
ttcttgaacgctggtattacgctacgtctgacagataagcgagttctgaaagaagacggt
tcattcaagtccgaggtattccattcggatgagggattgaaagagtttgtccgctatatc
gaccgttctaaagagaaactgattccagacgtaatccatatcgttaccgagaagcagggt
atccctgtcgaggtggcgttaacttataatacttcttacaatgagagcgtattctcttac
gtaaatgatattaacacgatagaaggtggtacacacttagccggtttccgccgtggcctg
acccgtacgttgaaaaagtacgccgaggattctaaattattggagaaagccaaggtggag
attcaaggggatgacttccgtgaaggtttgaccgccgttatctctatcaaggtagccgaa
cctcagttcgagggacagacaaagacgaagctgggtaatagcgaggttaccggtgcagtg
gatatggcgatcggtgaggcgttaggctattatttggaagaacatccgaaagaggcgaaa
ataatcgtcgacaaggtgatcttggccgctcaagcccgtcatgccgctcgtaaggctcgc
gaattggtacaacgcaaatctccgctgacaggaggtgggcttcccggtaaattggcggac
tgttcctctaaagacgcgtcgatctgcgaattgttccttgtcgaaggagactccgcaggt
ggtacggctaagcaaggacgcgaccgtaacttccaagcgatcctaccattgcgcggtaag
atcttgaacgtggagaaagcgatggatcataagatcttcgaaagcgaggaaatccagaac
atctatcgcgcgatgggcgtaaccgtcggtacggaggatgacccgaaagcgttgaacatg
gagaagctgcgttaccacaaggtgattatcatgaccgatgccgatgtggacggtagccac
atcgccacattgatcttgaccttcttcttccgccgtatgcgttccttgatcgagaacgga
tatgtgtatctggcgactcctcccctctatttgtgtaagaaaggtaaggttgaggaatac
tgctggaccgagcaacaacgtcagcagttcatcttaaaatatggaggaggcaacgagaac
tcgatccatacacaacgatacaaaggtttgggagaaatgaacgaccatcaattgtgggat
acgaccatgaacccggaaaaccgtacgttaaagcagatcacgatcgacaacgcagccgag
gctgaccaaatcttcgccatgttgatgggtgaagacgtaggccctcgccgcgagtttatc
gaggaaaacgctacatatgctaacatagatgcttaa
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