Parabacteroides distasonis: BDI_3716
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Entry
BDI_3716 CDS
T00549
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pdi
Parabacteroides distasonis
Pathway
pdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BDI_3716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_3716
Enzymes [BR:
pdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BDI_3716
DNA repair and recombination proteins [BR:
pdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BDI_3716
Prokaryotic type
BDI_3716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABR45408
UniProt:
A6LI94
LinkDB
All DBs
Position
complement(4538208..4538870)
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AA seq
220 aa
AA seq
DB search
MDVKIEESWKKRLADEFEKDYFKQLTDFVKQEYRQGTVYPPGPYMFNAFEHCPFDKVKVV
ILGQDPYHEPGQAHGLCFSVQDGVPFPPSLINIFKEIQDDLGHPVPTTGNLIRWADQGVL
LLNATLTVRAHQAGSHQNRGWETFTDAVIHRLAAERSHIVYILWGSYAQKKGAFIDSSRN
LVLKSAHPSPLSAYRGFFGNKHFSKANDYLIATGQTPIEW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaagattgaagaaagctggaaaaaacggttagccgacgagtttgaaaaagat
tatttcaagcaattgaccgatttcgttaaacaagaataccgccaaggtactgtttatcct
cccggtccttatatgttcaacgcttttgagcactgcccgttcgataaagtgaaggtcgtt
atcctcggccaagatccttatcacgagccgggacaggcgcacggactttgtttctccgtg
caggatggggtacctttccccccttccctcatcaatatattcaaagaaatacaagatgac
ttagggcatccggttccaacaaccggcaacttgattcgttgggcagatcaaggcgtatta
ctgctaaacgccacgctcacagtacgagcgcatcaagccggttcccatcaaaatagaggt
tgggagacctttaccgatgctgttattcatcgtctggcggctgaaagaagccatatcgtt
tacatattatggggttcctacgcacaaaagaaaggtgctttcatcgattcatcccgtaac
ctggttcttaaatcagcccatccgtccccactttccgcttaccggggattcttcggaaac
aagcatttcagcaaagccaatgattatttaatcgcaactgggcaaactcccatcgaatgg
taa
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