Parabacteroides distasonis: BDI_3794
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Entry
BDI_3794 CDS
T00549
Name
(GenBank) RNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pdi
Parabacteroides distasonis
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdi03009
]
BDI_3794
Enzymes [BR:
pdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BDI_3794
Ribosome biogenesis [BR:
pdi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BDI_3794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GH97_C
S4_2
Motif
Other DBs
NCBI-ProteinID:
ABR45480
UniProt:
A6LIG6
LinkDB
All DBs
Position
complement(4623032..4623946)
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AA seq
304 aa
AA seq
DB search
MRKRSEYKGGDNRRKPSKERQVTVGESNTLLPFLFELLKEQSRSSVKGLLSRGQISVNGK
VTRQFDAPLNPNDTVGINYGRGKVEFNNPLLRIVWEDDDLIVINKREGLLSVSTDRIKER
TAYRILSDYLKECDPRNKIFVLHRLDRDTSGIMMFAKNQKVKEQLQSNWSEAITQRTYVA
VIEGRPEKDTDLIVSNLVENKHMQVYVTQDGDGKEAITRYRLLQTNNRYSLVELDLETGR
KNQIRAQMQSIGHPIAGDSKYGAETNPAGRLMLHARRLCFIHPVTGEEMRFETRIPEKFT
STAK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcgatctgagtataaaggaggggataatcgacgtaaaccctctaaagaacga
caggtaacggtgggtgaaagtaacactttgctacctttcctgttcgagttattaaaagaa
caaagccgttcatccgtgaaaggattattgagcaggggacagatctcggtaaacggaaaa
gtcacccggcagttcgatgccccgctgaaccctaacgatacggtcgggatcaactatgga
agagggaaggtggaattcaacaatccgttacttagaattgtttgggaagatgatgacctc
atcgtgatcaacaagcgggaaggtttgctatccgtatctaccgatcgtatcaaggagcgt
acggcctaccgtatactgagcgattacttgaaagaatgcgaccctcgcaacaagatattc
gtcttgcaccgtctggaccgagacacatcgggtatcatgatgttcgccaagaaccagaag
gtaaaagagcaactacagtccaactggagcgaggctatcacgcaacgaacctacgtggcc
gtgatagagggacgaccggagaaagacacggatttgatcgtatccaacctcgtggagaac
aagcatatgcaagtgtacgtgacacaagatggtgacgggaaggaagcgatcacacgctac
cgactcctgcaaacgaacaatcgctattcgctcgtggaactcgatctggagacgggacgc
aagaaccaaatccgtgcgcagatgcaatccatcggccatccgatagccggagactctaaa
tacggggcggagacaaatcccgccggacgcttgatgctccatgcccgcaggctctgtttc
atccatccggtaacaggcgaggagatgcgcttcgagacacggatcccagagaaattcaca
tcgacagcaaagtaa
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