Parabacteroides distasonis: BDI_3847
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Entry
BDI_3847 CDS
T00549
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdi
Parabacteroides distasonis
Pathway
pdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BDI_3847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdi03021
]
BDI_3847
Transcription machinery [BR:
pdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDI_3847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_23
HTH_5
PhyR_sigma-like
HTH_11
WHD_HrcA
Phage_terminase
DUF8516
Motif
Other DBs
NCBI-ProteinID:
ABR45530
UniProt:
A6LIL6
LinkDB
All DBs
Position
4684056..4684673
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AA seq
205 aa
AA seq
DB search
MGVFVRDIKGLLESVSVDNRGAFERFYNLYYDQVFRFAYYCLGEKEACREVVTDVFFSVW
QSRKRLKEIDNIDTYLYISVRNESFRYQARNKDLNRASLNELLPLMEEEDEGSPEEHLEL
KEMREMLDKAIDELPEKCRLVFLMSREEGLKTKEIAEILSVQESTVRVQMKIAIEKLVAR
LKPSFPNISFSLLLMFIFNVIYRSA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgggagtttttgtgcgagatatcaaagggttgcttgaatctgtgtcggtagataacagg
ggagctttcgaacgtttttataatttatattatgatcaggtttttcgcttcgcttattat
tgtttaggcgagaaggaggcatgccgtgaagttgtgacagatgtttttttctcggtctgg
caatctcggaaacgattaaaggagattgataatatagatacctatttatatatttctgta
cgtaacgagtcttttcgttatcaagcaaggaataaagacttgaatagggcttctttaaat
gagttgttgccattaatggaagaggaagatgagggttctccggaggagcatttggagtta
aaagagatgagagagatgcttgataaagcgattgacgaacttcctgagaaatgccgtctt
gtgtttttgatgtctcgtgaggagggattgaaaacgaaggagatcgcggaaatattatcg
gttcaagagagtacggttcgtgtacagatgaagatcgctatagaaaaattggtagcccgg
ttgaagccgagctttccaaatatttcattctctttattgctgatgtttatttttaatgtg
atttatagatctgcttaa
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