Phyllostomus discolor (pale spear-nosed bat): 114488741
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Entry
114488741 CDS
T07739
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114488741 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114488741 (SMG5)
03032 DNA replication proteins [BR:
pdic03032
]
114488741 (SMG5)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114488741 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
114488741 (SMG5)
DNA replication proteins [BR:
pdic03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
114488741 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
114488741
NCBI-ProteinID:
XP_028358305
UniProt:
A0A6J2KYB8
LinkDB
All DBs
Position
14:complement(49653240..49680023)
Genome browser
AA seq
1012 aa
AA seq
DB search
MSQGPATGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSRYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
QSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVI
ICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDD
PESKEPLEKEEPPPTEPQVGEARKSRKFSRLSCLRRRRRHLPKVGDDSDLSEGFDSDSSR
DSARASEGSDSGSDKSLEGRGTAFDAETDSEMNSQESRSDLEDMEDEEGTRSPALEPPRT
RSEAPESLNGPLGPSEASLASNLQAMSTQMFQTKRCFRLAPTFSNLLLHPTTEPHSLASH
KPCVNGDVDKPSEPASEEGSESEGSESSGRSCRNERSIQEKLQVLTAEGLLPAVKVFLDW
LRTNPDLIVVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALSPEVHVLLESCELPDLPS
TLLLPEDMALRSLPPLRAAHRRFNFDTDRPLLSTLEESVVRICCIRSFGHFVARLQGSIL
QFSPEVGIFVSTAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSL
QQPKAQSAMSPYLVPDTQALCQHLPIIRQLATSGRFIVIIPRTVIDGLDLLKKEHPGARD
GIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQGAGEE
DPSGMVTIITGLPLDNPSVLSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggccccgccacaggggagagcagcgaacccgaagcaaaagtcctccacact
aagcggctctaccgggctgtggtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccggagaacattagcctgaggaacaagctgcgt
gaactctgtgtcaagcttatgttcctgcacccagtggactatggaaggaaggctgaggag
ctgctatggagaaaggtatactatgaagttatccagcttatcaagactaacaaaaagcat
atccacagccggagcaccttggagtgtgcctacaggacacacctggtcgctggtattggc
ttctaccagcatctccttctctacatccagtcccactaccagcttgaactgcagtgctgc
atcgactggacccatgtcaccgaccccctcataggatgcaagaagccagtgtctgcctca
gggaaggagatggattgggcacagatggcatgccatcgatgtctggtgtacctgggggat
ttgtcacgatatcagaatgaattagctggtgtagacaccgagctgctagctgagagattt
tactaccaagccctgtcagtagctccccagattggaatgcccttcaaccagctgggcacg
cttgcaggcagtaggtactataacgtggaagccatgtattgctacttgcgctgcatccag
tcggaagtgtcctttgagggggcctatgggaacctcaagaggctatatgacaaggcggcc
aaaatgtaccaccagctgaagaagtgtgagactcggaaactgtcccccagcaagaaacgg
tgtaaagacattaagaggttgctggtaaactttatgtatctgcaaagcctcctgcagccc
caaagcagctctgtggactcagagctgacgtcactttgccagtccgtcctggaggacttc
aacctctgtctcttctacctgccctcctcacccaacctcagcctggccagtgaggatgag
gaggagtatgagagtggatatgctttcctcccagatcttctcatctttcaaatggtcatc
atctgccttatgggtgtgcacagcttgaagagagcaggatccaagcagtacagtgcagcc
attgccttcaccctggccctgttctcccacctcgtcaaccatgtcaacataaggctgcag
gctgagctggaagagggggagaaccccgtcccggcattccagagcgacggcacagatgac
ccagagtccaaggaacccttggagaaggaggagcctcctcccacagaacctcaagtgggc
gaggcccgaaagagccggaagttctcccgcctctcctgcctccgccgccgccgccgccac
ctgcctaaagttggtgatgacagtgacctgagtgaaggctttgactctgactcgagccgt
gactcggcccgggccagtgagggctcagacagtggctctgacaagagccttgaaggtagg
ggaacagcctttgatgctgagacagactcagaaatgaatagccaagagtctcgatcagac
ctggaagacatggaggatgaagagggaacacggtctccagccctggaaccccctcggacc
aggtcagaggctcctgagtccctcaatggccctctgggccccagtgaggctagccttgcc
agcaatctacaagccatgtccacccagatgttccagaccaagcgctgcttccgactggcc
cccaccttcagcaacctgctcctccaccccaccactgaacctcacagcttggccagccac
aagccttgtgtcaatggagatgtggataagccctcagagccagcctctgaggagggttct
gagtcggagggcagtgagtccagtgggcgctcctgtcggaatgagcgcagcatccaggag
aagctgcaagtcctgacggcggaaggcctgcttcccgccgtgaaggtcttcctggactgg
ctgcggaccaaccccgacctcatcgtcgtgtgtgcacagagctctcagagtctgtggaac
cgcttgtctgtgttgctgaatctgttgccagctgctggcgaactccaagagtctggcttg
gccttgtctcccgaggtccatgttcttcttgaaagttgtgaactgcctgacctcccctct
accctgctgctcccagaggacatggcccttcgcagcctgcctcccctccgggctgcccac
agacgctttaactttgacacggaccggcccctgctcagcaccttagaggagtctgtcgtg
cgaatctgctgcatccgcagctttggccactttgtcgcccgcctgcaaggcagcatcctt
cagttcagcccggaagttggcatcttcgttagtactgcccagtccgagcaggagagcctg
ctgcagcaggcccaggcccagttccgcatggcgcaggaagaagctcggcggaacaggctg
atgagagacatggcacagctgcgacttcagctcgaggtctctcagctggaagggagccta
cagcagcccaaggcccagtcagcaatgtcaccctacctcgtccctgacacccaggccctc
tgccaacacctccccatcatccgccagctggccaccagtggccgcttcattgtcatcatc
ccaaggacagtgatcgatggcctggatttgctgaagaaggaacacccaggggcccgggat
gggattcgatacctagaggcagagtttaaaaaaggaaacaggtacattcgctgccagaaa
gaggtagggaagagctttgagcgacataagctgaagagacaggatgcagatgcctggact
ctctataagatcctggacagctgcaaacagctaactctggcccagggggcaggtgaggag
gacccaagtggcatggtgaccatcatcacaggccttccactggacaaccccagcgtgctc
tcaggccctatgcaggcagccctgcaggccgctgcacacgccagtgtggacatcaagaat
gttctggacttctacaagcagtggaaggagattggttga
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