Phyllostomus discolor (pale spear-nosed bat): 114489960
Help
Entry
114489960 CDS
T07739
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic05016
Huntington disease
pdic05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
114489960 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
114489960 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114489960 (HTT)
04131 Membrane trafficking [BR:
pdic04131
]
114489960 (HTT)
03029 Mitochondrial biogenesis [BR:
pdic03029
]
114489960 (HTT)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114489960 (HTT)
Membrane trafficking [BR:
pdic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114489960 (HTT)
Mitochondrial biogenesis [BR:
pdic03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114489960 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
114489960
NCBI-ProteinID:
XP_028359645
UniProt:
A0A6J2L221
LinkDB
All DBs
Position
1:1410428..1501524
Genome browser
AA seq
3128 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQPPPPSQPPQPPPPQPQPPPPPPPPPPPPGPAVAEEQL
PRPKKEHSATKKDRVTHCLTICESIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDVRM
VADECLNKVIKALMDSSLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPY
LVNLLPCLTRTSKRPEESVQETLAAAIPKIMASFGNFANDNEIKVLLKAFLANLKSSSPT
VRRTAASSVVSICQHSRRTQYFYSWLLSVLLGLLAPVAGEHPPLLVLGVLLALRCLVPLL
QQQVQDTSLKGSFGVTRRETEVSPSTEQLVQVYELTLRYAQHPDHNVVTGALELLQQLLR
TPPPALLRALTTPGGLAQLGAPGQEPGGRSRSGSIVELIAGGGSSCSPVLPRKQEGTERF
GEAAALEDDPEPRPEGSSPAFAASVKGEICGELAASPGASSPGSASAAAASADHDIITEQ
PRAQHTLQPDAVDLAGCDLTSAGTDGDEEDVLSRSSSRISAVPSDAAVDLNDGTQASSPV
SDSSQTSTEGPDSAVTPSDSSEIVLDSADGQYSGLQLGPPQDGEEEEEEEEPPGLLADED
SDAFPHSSVDALQRARVLGSVGHSRQPSDGSVDRFVSRDETADPGDQEDKPCRVKGDIGQ
STDEDSAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAAVALYPEAFFS
KLYRAPPDAAEHAEEQCVSDVVNYTAHGDPQVRGATAVLCGALLCSVLGRSRFRVGGGLG
SVRTLTGSTFSLADCVPLLQKTLKDESSVTCKLACTAVRHCVMSLCSSSYSDLGLQLITD
VLSLRSSSYWLVRTELLETLAEVDFRLVSFLEAKAERLHRGAHHYTGLLKLQDRVLNDVV
IYLLGDEDPRVRHVAAASLIRLVPKLFYRCDQGQADPVVAVARDQSSVHLKLLMHEAQPA
SHFSVSTITRMYRGYSLLPSMTDVTLENNLSRVVAAVSQQLVTATTRALTFGCCEALCLL
STAFPVCVWSLGWHCGVPPLGAPDESRKSCTVGMVTTVLTLLSSAWFPLDLSAHQDALIL
AGNLLAASAPKSLRSSWATEEEAGPAAGKQEEAWPALGDRSLVPMVEQLFSHLLKVVNVC
AHVLDEVAPGPAAKAALPSLSNPPSLSPIRRKGKEKEPGEQASVPLSPKKGSEASPASRQ
SEGSGPVTASKSSSLGSFYHLPSYLRLHDVLKATHANYKVTLDLQSSTEKFGGFLRSALD
VLSQVLELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGSS
SNPSKSQGRAQRLGSSSARPGLYHYCFMAPYTHFTQALADASLRTLVQAEQDHDTSGWFD
VLQKVSTQLKTNLTSVTKNRADKNAIHSHIRLFEPLVIKALKQYTTTTCVQLQRQVLDLL
AQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSK
QIIGIPKIIQLCDGVMASGRKAVTHAIPALQPIVHDLFVLRGANKADAGKELETQKEVVV
SMLLRLVQYHQVLEMFVLVLQQCHKESEDKWKRLSRQVADIILPMLAKQQMHIDSHEALG
VLNTLFEILAPSSLRPVDMLLRSMFVTPATLASVSTVQLWVSGVLALLRVLISQSTEDIV
LSRIQELSFSPHLISCPAISRLRGGDGGSPAGEQGEGRHAKSLPEDTFSRFLLQLVGILL
EDIATKQPRVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFTADGGAEGS
FYSLESLNARVRSLVPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRSLSSTKSLSP
QVSEEEEDSDLASKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLVVNHVQDLVGLS
HEPPVQDLVSAVHRNSAASGLFVQAVQSRCESLAAPTTLKKTLQCLAGIHLSQSGAVLTL
YVDKLLCTPFRALARMVDTLACRRVEMLLAANVQTSTAQLPVEELNRMQEYLQSSGLAQR
HQRLYSLLDRLRLATAPGSRGPSPPVTAHPLDGDGPLALETVSPDKDWYLRLVKSQCWTR
SDSALLEGAELVNRIPAGDMSAFMLNSEFNVGLLAPCLGLGARELSGGQRSPLFEAARVA
TLDRVASVVQQLPAGHHVFRPLLPAEPAAYWSQLSDLFGDVMLYRSLTTLARALAQYLLV
LPKLPGHLHLPPEKERDTVKFVVAALEALSWHLIHEHVPLSLDLQAGLDCCCLALRLPGL
WSLLASPEMVTHACSLIHCVRFILEAIVVQPGDQLLGPERRTDAPAAAREDAGPHTQSPE
YITAACRMVAEMVEALPSVLALGHERNSGTPAFLTPVLRNIVVSLARLPLVNSYTRVPPL
VWKLGWSPMPGGDFGTAFPEIPVEFLQEKEVFKEFIFRINTLGWTSRTQFEETWATLLGV
LVTQPLSTEQEESPPEEDTERTQINVLAVRAITSLVLSAMTVPVAGNPAVSCLEQQPRNK
PLKALDTRFGRKLSVIRGIVEQEIQAMVSKRENIATHHPYQAWDPVPSLSPATTGALISH
DKLLLQTNAERELGSMGYQLGQVSIHSVWLGNSITPLREEEWDEEEEEEADTPAPSSPPV
SPVNSRKHRAGVDIHSCSQFLLELYSRWVLPSSPARRIPVALVSEVVRSLLVVSDLFTER
SQFEMMYLTLTELRRAHPSEDEILLQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRSS
HLPCKTGALHGVLYVLECDLLDDTARQLIPVVCDHLLSSLRGAAHCVNVHSQQHVLVMCA
TAFYLVENYPLDVGPEFSASIIQMCGVMLAGSEESTPSAVYHCVLRGLERLLLSEQLSRL
DAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSEPSPAAPDSESVIVA
MERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMAT
VVYQVFQTLHSTGQSSMVRDWVMLSLSNFTQRAPVAMAVWSLSCFFVSASTSPWVSAVLP
HVISRMGRLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGTPYQRLLACLQ
NVHKEASC
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggagaagctgatgaaggccttcgagtccctcaagtctttccagcagcag
caacagcagccgccgccgccgtctcagccccctcagccgccgccgcctcagcctcagccc
ccgccacctccgccgccgcccccgccgccgcccggccccgcagtggcggaggagcaactg
ccccgaccaaagaaagaacactctgccaccaagaaggaccgtgtgacccattgtctgacg
atatgtgaaagcatagtggcccagtctctcagaaattctccagaattccagaaacttctg
ggcatcgctatggaactcttcctgctgtgcagtgacgacgccgagtccgatgtcaggatg
gtggccgacgagtgcctcaacaaagtcatcaaagctctgatggattccagtcttccaagg
ctacagctggagctctacaaagaaattaaaaagaatggtgctccgcggagcctgcgtgct
gccctgtggaggtttgctgagctggctcacctggttcggcctcagaaatgcaggccctac
ttggtgaacctgctgccgtgcctgacgcgaacaagcaagaggcctgaggagtctgttcag
gagaccttggctgctgctatacccaaaataatggcttcatttggcaattttgcaaatgac
aatgaaattaaggttctgctcaaggccttcctggcgaacctgaagtccagctccccgacc
gtccggcgcacggcggccagctccgtggtgagcatctgccagcactccaggaggacacag
tacttctacagctggctgctcagcgtgctcttaggtctgctggcccccgtcgcgggcgag
cacccgcccctgctggtcctgggggtgctgctcgccctgaggtgcttggtgcccctgctg
cagcagcaggtccaggacaccagcctgaagggcagcttcggggtcacgcggagagagacg
gaggtgtccccctcgacggagcagctggtgcaggtgtacgagctgaccctgcgctacgcc
cagcacccagaccataacgtggtgaccggggctctggagctcctgcagcagctgctccgg
accccgccccccgcactgctgcgggccctgaccacgcccggcggcctggcgcagctcggt
gcccccggccaggagcccggcgggcggagccgcagcgggagcatcgtggagctgatagcc
ggagggggctcctcgtgcagccctgtccttccaaggaaacaggaagggacggagcgcttc
ggggaggcggccgccctggaggacgaccccgagccgcggccggagggcagcagcccggcc
ttcgcagcctcagtcaagggcgagatctgtggggagctggccgcctctcccggggcctcc
tctcccggctctgccagcgcagccgctgcctccgcggatcacgacatcatcaccgagcag
ccccgggcccagcacacgctgcagccggacgcggtggacctggccggctgcgacctgacg
agcgccggcaccgacggggacgaggaggacgtgctgagccgcagctccagccggatcagc
gccgtcccgtccgacgcggccgtggacctgaacgacgggacgcaggcctcctcccccgtc
agcgacagctcgcagacctctaccgagggccccgattcggccgtgaccccttcggacagc
tccgagatcgtgttggacagcgctgacggccagtactcggggctgcagctcggccctccg
caggacggggaggaggaggaagaggaggaggagcccccgggcctcctggcggatgaggac
tcggatgccttcccacactcctccgtcgacgcccttcagcgagcacgtgtgctgggcagc
gtgggccacagcaggcagccgtccgacggcagcgtggacagatttgtgtccagggacgaa
accgctgacccgggcgatcaggaggacaagccttgccgggtcaaaggtgacatcggacag
tctacagacgaagattcggctcccctggtccattgtgtccgccttttatctgcgtcgttt
ctgctgactggggaaaaaaacgcgctggttccggatcgggacgtgcgggtcagcgtgaag
gcgctggcgctcagctgcgtcggggctgccgtggccctctacccggaggccttcttcagc
aagctgtacagggcccctcccgacgccgcggagcacgctgaggagcagtgcgtctcggac
gtcgtgaactacaccgcgcacggggacccgcaggtccgaggggccacggccgtgctctgc
ggggcgctcctctgctccgtcctcggccgctcccgcttccgtgtgggcggcgggctgggc
tccgtccggaccctgacagggagcacgttttctctggcggactgcgtccctctgctgcag
aagaccctgaaggacgagtcttctgtcacctgcaagctggcgtgcacggccgtgcggcac
tgcgtcatgagcctgtgcagcagcagctacagcgacctggggctgcagctgatcaccgac
gtgctgagcctgcggagcagctcctactggctggtgcgcacggagctgctggagacgctc
gcggaggtcgacttcaggctggtgagctttctggaggccaaagccgaacgcctgcacaga
ggggcgcaccattacacggggcttctgaagctgcaagaccgggtgctcaatgacgtggtc
atctacctgctcggggacgaggaccccagggtgcggcacgttgctgccgcctccctgatc
aggctcgttcccaagctgttctacaggtgcgaccaggggcaggccgaccccgttgtggcc
gtggccagagaccagagcagcgtccacctgaagctgctcatgcacgaggcgcagcccgcg
tcccacttctccgtcagcaccatcaccaggatgtacagaggctacagcctgctgccgagc
atgacggacgtcaccctggagaacaacctgtccagagtcgtcgccgccgtgtcgcagcag
ctggtcacggccaccacgcgcgcgctcacgtttggatgctgcgaagctctgtgtcttctc
tccacggcctttccggtttgcgtctggagcctgggctggcattgcggagtgcccccgctg
ggcgccccagacgagtcccggaagagctgcacggtcggcatggtcaccacggtgctcacc
ctgctctcgtcagcatggttcccgctggacctctcagcccatcaggatgctctgatcctg
gctggaaacctgcttgcagccagcgcccccaagtctctgaggagctcctgggccacggag
gaggaggccggcccggccgccggcaagcaggaggaggcgtggccggcgctgggggaccgc
agcctggtgcccatggtggagcagctcttctcccacctgctgaaggtggtcaacgtctgt
gcgcacgtgctggacgaggtggctcccgggcccgccgccaaggcagccttgccgtccctc
tcgaaccccccttccctgagccccatccgacggaaggggaaggagaaggagcccggcgag
caggcgtccgtgcccctgagccccaagaagggcagcgaggccagtccagcctcccgccag
tccgaaggctcggggcccgtcacagcgagtaagtcctcgtccctggggagcttctaccac
cttccttcctacctcaggctgcacgacgtcctgaaggccacccacgccaactacaaggtc
accttggacctgcagagcagcacggagaagttcgggggctttctgcgctctgccttggac
gtgctctcccaggtcctggagctggccacgctgcaggacatcgggaagtgcgtcgaggag
atcctggggtacctgaagtcctgcttcagccgggagccaatgatggccacggtgtgcgtg
cagcagctgttgaagacgctcttcgggacgaacctggcctcccagtttgacggctcgtcg
tccaaccccagcaagtcccaaggccgggcccagcgcctcggctcgtccagcgcgaggccg
ggcctctaccactactgcttcatggccccgtacacccacttcacccaggccctggccgac
gccagcctgcgcaccctggtgcaggcggagcaggaccacgacacctcggggtggtttgac
gtcctccagaaagtgtccacccagctgaagacgaacctcaccagtgtcaccaagaaccgt
gcggacaagaacgccatccacagccacatccgcctgttcgagcccctggtcataaaggcg
ctgaagcagtacaccaccaccacgtgcgtgcagctgcagaggcaggtcctggacctgctg
gcccagctggtgcagctgcgggtcaactactgcctcctggactcggaccaggtgttcatc
ggcttcgtgctgaagcagttcgagtacatcgaggtcggccagttcagggagtctgaggcc
atcatcccgaacatcttcttcttcctggtgctgctgtcgtacgagcgctaccactccaag
cagatcatcggcatccccaagatcatccagctctgcgacggcgtcatggccagcggcagg
aaggccgtgacgcacgccatcccggccctgcagcccatcgtgcacgacctcttcgtgctg
cggggcgccaacaaggcggacgcggggaaggagctggagacgcagaaggaggtggtggtg
tccatgctgctgcggctcgtccagtaccaccaggtgctggagatgttcgtcctggtcctg
cagcagtgccacaaggagagcgaggacaagtggaagcggctgtcgcggcaggtcgccgac
atcatcctcccgatgctggccaagcagcagatgcacatcgactcccacgaagcccttggg
gtgctgaacaccttgttcgagatcctggccccgtcctccctgcggcccgtggacatgctg
ctgcggagcatgttcgtcaccccggccacgctggcgtctgtgagcaccgtccagctgtgg
gtctccggagtgctggcccttctgcgggtcctgatctcccagtccaccgaggacatcgtc
ctgtcgcgcatccaggagctgtccttctccccgcacctcatctcctgcccggcgatcagc
aggctgagaggcggggacggtggctccccggcgggagaacagggcgaggggaggcacgcg
aagagcctgccggaagacacgttctccaggttcctcctgcagctggtgggcatcctgctg
gaggacatcgcgaccaagcagccacgggtggagatgagcgagcagcagcacaccttctac
tgccaggagctgggcacgctgctcatgtgtctgatccacatcttcaagtccgggatgttc
cggagaatcacagccgccgcctccagactcttcaccgcggacggcggcgccgagggcagc
ttctacagcctggagagcctgaacgcgcgggtgcgctccctggtgcccacgcacccggcc
ctcgtgctgctctggtgccagatcctgctgctcgtcagccacaccgactaccgctggtgg
gccgaggtgcagcagacccccaggaggcgcagcctgtccagcacgaagtccctgagcccc
caggtgtccgaggaggaggaggactccgacttggcgtccaagctggggatgtgcaaccgg
gaaatcgtccggcgaggggccctcatcctcttctgcgactacgtttgccagaacctgcac
gactccgagcacctgacctggctcgtcgtgaaccacgtccaggacctggtcggcctgtcc
cacgagccccccgtgcaggacctcgtcagcgccgtgcaccggaactccgccgccagcggc
ctcttcgtgcaggccgtccagtcccgctgtgagagcctcgccgcccccaccacgctgaag
aagaccctgcagtgcctggcggggatccacctcagccagtcgggcgccgtgctgacgctg
tacgtggacaagctgctgtgcaccccgttccgcgcactggcccgcatggtggacaccctg
gcctgccgccgggtggaaatgctgttggccgccaacgtgcagaccagcacggcccagctg
ccggtggaagagctgaaccggatgcaggagtaccttcagagcagcggcctggcgcagagg
caccagaggctctactccctgctggacaggctgcgtctcgccactgcccccgggtcccgc
ggcccctcccctccagtcacagcccacccgctggatggggacgggcccctggcactggag
accgtgagtccagacaaagactggtacctgcgcctggtcaagtcccagtgctggacgcgg
tccgactcggcgctgctggagggcgcggagctggtgaatcggatccctgcaggtgacatg
agtgcgttcatgctgaactcggagttcaacgtgggcctgctcgccccatgcctgggcctg
ggtgcgcgggagctctccggaggccagaggagtcccctcttcgaagcggcccgcgtggcg
actctggaccgcgtggccagtgtggtacagcagctccccgctggccaccacgtcttccgg
cccctcctgcccgcggagcccgccgcctactggagccagctgagcgacctgttcggggac
gtcatgctgtaccgctccctgaccaccctggcccgtgccctggcccagtacctgctggtg
ctccccaagctgcccggccacctgcaccttcccccggagaaggagagggacaccgtgaag
ttcgtggtcgcggccctggaggcactctcctggcacctgatccacgagcacgtgcccctg
agcctggacctccaggccggcctggactgctgctgcctggccctgcggctgcccggcctc
tggagcctgctggcctccccggagatggtgacccacgcctgctcactcatccactgcgtg
cgcttcatcctggaagccatcgtggtgcagcccggggaccagctcctcggtccggaaagg
aggacggacgccccagcggctgccagagaggacgcaggcccccacacccagagccctgag
tacatcacggcagcctgcaggatggtggcggaaatggtggaggccctgccgtccgtgctg
gccctggggcacgagaggaacagcggcacccccgccttcctcacgccggtgctcaggaac
atcgtggtcagcctggcccgcctgcccctcgtcaacagctacacgcgtgtgccccccctg
gtctggaaacttgggtggtcccctatgccaggaggggacttcggcacggccttccccgag
atccccgtggagttcctgcaggagaaggaggtcttcaaggagttcatcttccgcatcaac
accctagggtggaccagccgcacacagtttgaggagacgtgggccaccctgctcggtgtc
ctggtgacccagcccctctcgacggagcaggaggagagcccgccggaggaggacacggag
aggacccagatcaacgtcctggctgtgcgggccatcacctccctggtgctgagcgcgatg
actgtgcccgtggctggcaacccggccgtgagctgcttggagcagcagccgcggaacaag
cccctgaaggctctggacaccaggtttgggcggaagctgagcgtgatcagaggaatcgtg
gagcaggagatccaggccatggtgtcgaagagggagaacatcgccacccaccacccgtac
caggcgtgggaccccgtgccgtccctgtctcccgccacgacaggtgccctcatcagccac
gacaaactcctgctgcagaccaatgcggagcgggagctgggcagcatgggctatcagctg
ggccaggtgtccatccactcagtgtggctggggaacagcatcacgcccctgagggaggag
gagtgggacgaggaggaggaggaagaggccgacacccccgccccttcgtctccgcccgtg
tctccggtcaactccaggaagcaccgggccggggtcgacatccactcctgctcccagttc
ttgctcgagctgtacagtcgctgggtcctgccgtccagtccagcccggaggatccccgtc
gccctggtcagcgaagtggttcgctccctcctggtggtgtccgacctgttcacggagcgc
agccagttcgagatgatgtacctgacgctgacggagctgcggagggcgcacccgtccgag
gacgagatcctcctgcagtacctggtgccggccacctgcaaggcggctgctgtcctcgga
atggacaaggcggtggcggagccggtcagccggctgctggagagcacgctccggagcagc
cacctgccctgcaagacgggggcgctgcacggcgtgctgtacgtgctggagtgcgacctc
ctggatgacacggccaggcagcttatccccgtcgtctgcgaccacctcctctccagcctg
cgaggcgccgcccactgcgtgaacgtgcacagccagcagcacgtgctggtgatgtgcgcc
accgccttctacctggtggagaactacccgctggacgtggggcccgagttctctgcgtcc
atcatacagatgtgcggggtgatgctggccgggagcgaggagtccaccccgtccgccgtc
taccactgcgtcctgcggggcctggagcgcctcctgctgtccgagcagctctcccggctg
gacgccgagtccctggtcaagctcagcgtggaccgggtgaacgtgcacagcccgcaccgg
gccatggccgccctgggcctgatgctcacctgcatgtacacagggaaggagaaggtcagt
ccgggccggacctccgagcccagccctgccgcccctgacagcgagtccgtgatcgtggcc
atggagcgcgtgtccgtgctctttgacaggatcaggaaaggctttccctgcgaagcccgc
gtggtggcgcggatcctcccgcagttcttggatgacttcttcccgccccaagacgtcatg
aacaaagtcatcggggagttcctgtccaaccagcagccctacccgcagttcatggccacc
gtggtataccaggtgttccagaccctgcacagcacggggcagtcctccatggtgcgggac
tgggtcatgctgtcgctctccaacttcacgcagagggccccggtcgccatggccgtgtgg
agcctctcctgcttctttgtcagcgcgtccaccagcccgtgggtctcagcagtcctcccc
cacgtcatcagcaggatgggcaggctggagcaggtggacgtgaacctcttctgcctggtg
gccacggacttctacagacaccagattgaggaggagctggaccgccgggccttccagtcc
gtgttcgaggtggtggccgcgccgggaaccccgtaccagcggctgctggcttgtttgcag
aacgtccacaaggaggcctcatgctga
DBGET
integrated database retrieval system
