Phyllostomus discolor (pale spear-nosed bat): 114491473
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Entry
114491473 CDS
T07739
Symbol
SPG11
Name
(RefSeq) LOW QUALITY PROTEIN: spatacsin
KO
K19026
spatacsin
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic05014
Amyotrophic lateral sclerosis
pdic05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114491473 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
114491473 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114491473 (SPG11)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114491473 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
114491473
NCBI-ProteinID:
XP_028361322
UniProt:
A0A6J2L0W1
LinkDB
All DBs
Position
1:complement(157682869..157787479)
Genome browser
AA seq
2445 aa
AA seq
DB search
MAAEKWSGSAAAGGSCIAEERERVLPMLLLPVPAEATGRLGNWAQLHREQEVLGSLTAAG
SLQVLSLAPGGRGGGGCSLDGPLRQFVWEDSHNSSTPTERPRLLALSENYELLIYDFNLK
DGRCDGTILYSCSEEILQKLIKDQNISISLLSLRILSFHNNTSLLFINKFIILHIMFPEK
DAEIRVLNYFTLPLPAQAVDSIIDTQLCRGILFVLSSLGWIYIFDIVDGAHVAHVDLALH
QEDMCNEQQQEPAKIPSFTSLKVSQDLEVAVIISSSNSAIALNLNLYFRQHPEHLLCEKI
LEDDPIEGPKGIDEDDPINSDYNMKLTKFSFQVDRSWKAQLLSLNETINSSKLEVSHYAP
WFQDILHLEPPGSNNHCPSVPVWAFVPQDMMRSQYNFSQKDHAKTSVPERAWKRMYISEQ
EEPIELRCVSVTGFTALFTWAVEKTGWTIILWDLETEGMQCFCLGKKCIPIDNSGDPQLC
LALTENGLSLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQ
LDTVNFFLKSKENLLNPSPKSPVPDQFDQFPSHLYLRNVQELTPALDLLCSAIRESDSET
QSKNFSEQLLNLTLSFLNKQIRELFIQNEELDEYLQKGVNILTSYINELRTFMIKFPWKL
TDAVDEYDVNENVPKVKESNIWEKLSIEEVIANAILNNKIPEAQTFFRINSHSAQRLEEL
IRIGLDLVFDNLKKNNVKEASELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKKY
FSEKEKSTIDFVHQVEKFYSEYLQENMQIQSFPRYWIKEQDFFKHKSALDSFLKYDYIDK
FDKQNHTIALNWAQWWNQLTQESILLPRINPEEYKSYSPEALWRYFTARHDWLSIISWIG
EFQTQNNCSSLQQNKWPPLTVDVIDQNTCCNNNMRNKIIDELARNGIFLISELEDFELFL
LRLNRIGGVMQDALPVQNYKSKEGWDFHSHFILYCLEHSLQYLLYVYLDCYKLSPPNCPF
LDKKELYEDHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHT
LLALATTMYAPGGVSLVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQYAAPSVLP
PDITLYHLMQSLLPFDPSRLFGWQSANTLAIGDASSHLPHFSSPDLVNKYAVVERLNFAY
YLYHGRPSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFHMPSIGAACVCFLELL
GLDSLKLRVDMKVANIILNYRCTNEDAQYSFIRESLAEKLSKLAEDERAAIEELLVLLEE
GIWNNIQQEEIKRLSNESSSRWTLVVQFCRLHNVKLSTAYLRECARANDWLQFIIHSQLH
NYHPEEVKSLLQYFSPVLQDHLRLAFENLPSVSNSSMDSDQVCNRCPQELQRHKEEITDF
FEILFRCSKEPNSWCWLLAEAVKQQAPILSVLASCLQGASGIPCLCVWIITSVEDSVAAE
AMGHIQGSVEGHTWDLEDLSVIWRTLLRRQKSKTLIRGFQLFFKDSPLLLMMEMYELCMF
FKNYKEAKAKLLEFQKTLETLETAAIKVHTAIPVPWLKEQVCFLLKLMLQQCRTQYELGK
LLQLLVAIEHLFSDGPDIKKLCVLSQILKDTSITINHAIITSYSLENFQHECRFILEKLE
TNGQFASARRVAELAELPVDNLVIEEITQEMQTLKHIDQWSLKQARIDFWKKCHENFKKN
SISSKAASSFFSAQALVACEYPNEEGQSNTEERHLLLTLAGHWLAQEDLVPVEKLEELEK
QIWLCRITQHTLRGNQEEIEPRFSQQISTSGELPFDGLASEFSFSKLAALNTSKYLELNG
LPSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALAS
GEASVDDLHTEIHALLQSAELLEEEKEPNIPLRKAPSTSSLDSQSFVMLPSSDEVVTNLE
ILTSRCLHGKNYCRRVLCLYELSKELGCSYTDVATQDGEAMLRTILASQRPDRCKRAQAF
ISTQGLEPDRVAELVAEEVTRELLSQSEGTGHKQMVTPAEESQAFLQLTALCQDHTLVGM
KLLEKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDDHLAPNEEYGL
VVRLLTGIGRYNEMTYIFELLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKH
NMIALCFSMCREIGENHEAAACIQLKLIESQPWEDNLKDGHQLKQLLLKXLTLMLDAAES
YAKDSCVRQALHCHRLTKLLTLQIHFLNTGQNTMLINLGRHRLMDCIMSLPRFYQASIVA
EAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLRTSVFEEISEKVKQRQPTEMAVKNL
KKLLTCCEDVYLYYKLAYEHKFYDVVNMLLKDPQTGCCLKDMLAG
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagaagtggtccggaagtgctgccgctggcggcagctgcatcgctgaagag
cgggagcgggttctacctatgttgctgctgcccgtccccgccgaggcaacggggcggctg
ggaaactgggcgcagttgcacagagagcaggaggttctggggagcctgaccgctgcaggc
agccttcaagtgctttctttggcgccaggcggccggggcgggggtggctgctccctagac
ggccccttacggcaatttgtgtgggaggattctcataatagcagcacaccaacagagagg
cccaggctgcttgctcttagtgaaaattatgaactgctcatctatgactttaacttgaaa
gatggaagatgtgatggaaccattttgtatagctgtagtgaggagatactgcaaaagctt
attaaagatcaaaatatcagtatttccttattatctttgagaattctgtcatttcacaat
aatacatcattattattcatcaacaaatttatcattctacacatcatgtttcctgaaaaa
gatgctgagattagagtactcaactatttcactttacccttgcctgcccaggcagtggat
agtattattgacacgcagctctgcagaggaattctttttgttttgagtagtttaggctgg
atctacatttttgacattgtggatggtgcacatgtagctcatgtggatttagcacttcat
caagaagatatgtgtaatgagcagcaacaggagccggccaagattccttcctttacttca
ctgaaagtgtctcaagacctagaagttgcagtgattatcagctcctccaactctgcgatt
gctcttaacttaaatttgtatttcaggcaacacccagaacacctactttgtgaaaaaatt
ctggaagacgatcctattgaaggccctaaggggatagatgaagatgatcctattaattct
gactacaacatgaaactgaccaagttttccttccaagttgataggtcttggaaagcccag
ctgttatcactgaatgaaaccataaatagctccaaactggaggtttcccattatgctcca
tggttccaggatattctgcatctggagccccctggatctaataaccactgccccagtgtg
ccagtttgggccttcgttccacaggacatgatgcgcagtcagtataatttttcacagaaa
gatcatgccaagaccagtgtcccagagagagcatggaaaagaatgtacattagtgaacaa
gaggaacccatcgagcttagatgtgtgtctgtgacaggattcactgcactgtttacttgg
gcagtggagaagacaggctggaccattatcctttgggatttggagactgagggcatgcag
tgcttttgccttggcaagaagtgtattcctatagataatagtggagacccacaactgtgc
cttgctttgacagaaaatggactctctctgattttgtttggtttgactcaagaggagttt
ttaaatagactaatgatccatggaagtgccagcactgtggactctctttgccatctcaat
ggttggggaaggtgctcaatccccatacacgcactagaggctgggatagaaaatcgtcag
ctggacacagtaaatttctttttgaagagcaaggaaaatcttttgaatccatcccccaaa
tctcctgtacctgatcagtttgatcagtttccatctcatttatatttaagaaatgtgcaa
gagcttacaccagcattggatttactttgctcagcaattagagaaagtgattctgaaacc
caaagcaaaaacttttcagaacaattgcttaatcttacactgtccttcctcaacaagcaa
ataagggagctttttattcaaaatgaagagttagatgaatatctacagaaaggggtgaac
attttgaccagctatattaatgaacttcgaaccttcatgataaagtttccttggaagcta
acagatgctgtagatgaatatgatgtaaatgaaaatgtccccaaagtaaaggagagcaat
atatgggagaaactcagcattgaggaagttattgctaatgccattttaaacaacaaaata
ccagaggcacaaactttcttcaggattaatagtcattccgctcaaagactcgaagagctt
attagaataggtctagatttggtctttgacaatttgaaaaagaacaatgtaaaggaagcc
tccgagcttttaaagaatatgggctttgatgtaaaagaccagttgctcaagatatgcttc
tatacaactgataaaaatatacgggactttttggttgaaattttaaaagaaaaaaaatat
ttttctgagaaagaaaaaagtactatagacttcgtgcatcaagttgagaagttttattca
gaatatttgcaagaaaatatgcagatccagtcctttcccaggtattggataaaggaacaa
gattttttcaagcacaaatctgctttggactcattcctgaaatatgattatatagataaa
tttgacaaacagaatcatacaattgcattaaattgggctcagtggtggaatcaactaaca
caagaatctatccttcttcccaggataaatccagaagaatacaaatcatattctcctgaa
gccctttggagatatttcacagctcgccatgactggttaagcattatctcatggattgga
gaatttcagacccagaataattgttcttcacttcagcagaacaaatggcctcctctgact
gttgatgtcattgatcagaatacttgctgcaacaacaacatgaggaataaaattatagat
gagctggccaggaatgggatttttcttatatctgaactggaagactttgaactcttcctc
ctaagactgaaccgcattgggggtgtgatgcaagatgcccttcctgttcaaaactacaaa
tccaaggaaggatgggatttccattctcacttcattctctattgtttggagcacagtctg
cagtatcttctttatgtctatcttgactgttataagcttagtcctccaaactgtcccttt
ttggacaaaaaagaattatatgaagatcacccttggtttgaatttttagttcagtgtcga
caagtttccagtaacttaacagatcctaagctgatcttccaggctagccttgcaaatgct
caaatactgattcccagcaaccaggccagtgtgagcagtatgctgctggaaggacacacg
ctcctggctcttgccaccacgatgtacgcacctggcggtgtcagcctggttgtccagaat
gaagaaaacgagaactgtttgaagaaagtggatccccagctattgaagatggcattaact
ccttatcccaagctaaagactgctctcttcccacagtatgctgcccctagtgtcctgccg
cctgacattacactctaccacctgatgcagtcattattgccctttgatcctagcagactg
tttggctggcagtctgccaacacactagctataggagatgcatccagtcatctcccacac
ttctctagccctgacctggtgaataaatatgctgtagtggaacgtctgaattttgcttat
tatttatatcatgggcggccatcatttgcatttggtacttttctggtccaagagctaact
aagagcaagacacccaaacagctgatccagcaagtaggaaatgaagcctatgttttaggc
ctctcttccttccacatgccttcaataggagctgcctgtgtttgcttcttagaattgctt
ggcctcgacagcctcaagctcagagttgatatgaaagtggccaatataattctgaactac
aggtgtaccaacgaagatgctcagtatagctttatcagagagtctctagctgaaaaactt
tctaaactggctgaggatgaaagggcagccatagaagagttgcttgttctcttagaagaa
ggtatatggaacaacattcaacaagaagaaataaaaaggttatccaacgaatctagcagc
cgttggacattagtggtacagttctgcaggctccacaatgtgaaactaagcacagcttac
cttagagaatgtgccagagcaaatgattggttacagttcattattcacagccagctccat
aattaccaccctgaggaggtgaaatctcttctccagtactttagccctgtccttcaagac
cacttaaggctggcttttgagaacttgccctcagtgtccaactccagcatggacagtgac
caagtctgcaacaggtgcccccaggaactccagagacacaaagaagagataactgatttc
tttgaaattttgttccggtgctccaaggagccaaactcctggtgctggcttctggctgaa
gcagtgaaacaacaggccccaattcttagtgtcctagcctcatgtctccagggtgccagt
ggtattccttgtctctgtgtttggatcatcacttctgtggaggacagtgttgcagctgaa
gcaatgggacacattcaaggctccgtggagggtcatacctgggatctcgaggacctctca
gtcatctggaggacattattaagaaggcagaagagcaaaactctcatcagaggtttccag
cttttctttaaggattccccattactattgatgatggaaatgtatgaactctgtatgttc
ttcaagaattataaggaagccaaagctaaactactggagttccagaagacccttgaaact
cttgaaacagcagccataaaggtccacactgccatccccgttccatggctgaaggagcag
gtgtgttttcttctgaagcttatgctgcagcagtgtaggacccagtatgagctggggaag
cttttacagctgttggttgcaatagagcatctcttctctgatggtccagatataaagaag
ctgtgtgtcctaagccaaattttgaaggatacatccataactattaatcatgcaattatt
accagctatagccttgagaattttcagcatgaatgtagatttattttggaaaaactggag
acaaatggacagtttgcttcggctagaagggtagcagagttagctgagttacctgtggac
aacttggttattgaagagataacacaagaaatgcagaccttaaaacacattgaccagtgg
tccctgaaacaagcaagaattgacttctggaaaaaatgccatgagaattttaagaaaaat
tccatttcaagcaaagcagcctcttcctttttctcagcccaggcccttgtggcatgtgag
tacccaaatgaggagggacagagcaatactgaagaacgccatctgctgctcaccctggca
ggacactggcttgctcaggaggacctggtgcctgtggagaagctggaggagctggagaag
cagatctggctctgccgtatcacccagcacaccctcagaggaaaccaggaggaaatagag
cccagattttctcaacagatctcaactagtggtgaacttccctttgatggcttagccagt
gagttttcattctctaagctggctgctctgaacacatcaaaatacttagagcttaatggt
cttccatctaaagagacttgtgagaacagactagattggaaagagcaggagtcactaaac
tttttgattgggcgcctattggatgatggctgtgtgcatgaagcaagtagagtatgccgg
tattttcatttctataaccaagatgttgccttggtattgcactgcagagcgctggcttca
ggggaagctagtgtggatgacctacatacagagatccatgctctcctacaaagtgctgaa
ctgctggaggaagaaaaagaacctaacattcctctaaggaaagccccaagcacttcaagt
ttggatagtcagtcatttgtgatgctgccctccagtgatgaagtggtaactaatctcgaa
attctgacaagcagatgcctccatggaaaaaactactgccggcgggtcctctgcctgtat
gaactttccaaggagttgggctgttcctacacagatgtcgccacccaagatggggaggcc
atgctccgcacaatcttggcctctcaacggcctgatcgatgcaagagagcccaagccttc
atcagcacccagggccttgagccagatcgggtggctgagctcgtggctgaagaggtgacc
cgggagctgctgtcccagtcagagggaacaggacataagcagatggtcactccagcagag
gaaagccaggcatttcttcagctgaccgctttgtgtcaggaccacaccttggtaggcatg
aagttgttggaaaagatttcctccgttccccatggggaactgtcttgcaccacagagctg
ctgattctggcccatcactgcttcacgctgacatgccacatggagggcatcatccgagtg
ctgcaggctgcccggctgctcacagatgaccatttggcccccaatgaggagtatgggctg
gtggtacgtctcctcactggcattggaagatacaatgagatgacatacatatttgaattg
ctgcataaaaaacactacttcgaagtgctgatgcggaagaagctggatccgagtggtacc
ctgaagacagccctactggactacatcaaacgctgccgccctggggacagtgagaagcac
aacatgattgccctgtgcttcagcatgtgcagggagatcggggagaaccatgaggcagct
gcctgcatccaactgaaactgattgagtctcagccctgggaggacaatctcaaggatgga
caccaactgaagcagctgctgctgaagnccctgactctgatgctggatgcagcagagagc
tatgccaaggactcctgtgtgagacaggccctgcactgtcaccggctcaccaagttgcta
acactgcagattcattttctgaacactggccagaacaccatgcttatcaacctgggccgc
cataggctgatggactgcatcatgtccctacctcggttctaccaggcttctattgtggct
gaggcctatgactttgttcccgattgggctgaaattctataccaacaagtgattcttaaa
ggagactttaattacttggaagaatttaagcagcaaaggttactaagaaccagtgtattt
gaagagatttccgaaaaagttaaacaacgccagcctactgagatggctgtgaaaaacctg
aagaagttactcacatgttgtgaagatgtctacctgtattataagctggcatatgaacat
aaattttatgatgttgtaaatatgcttctgaaggaccctcagacaggttgctgtctaaag
gacatgctagcaggttag
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integrated database retrieval system
