Phyllostomus discolor (pale spear-nosed bat): 114492486
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Entry
114492486 CDS
T07739
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03013
Nucleocytoplasmic transport
pdic05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114492486 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114492486 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114492486 (NUP54)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114492486 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF892
Motif
Other DBs
NCBI-GeneID:
114492486
NCBI-ProteinID:
XP_028362605
UniProt:
A0A6J2LAI9
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Position
1:complement(47747893..47773103)
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AA seq
565 aa
AA seq
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MAFNFGAPSGTAGTAAATAAPTGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVP
TTSATPFNFGNSLASAGGFGGFGTTTTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFGTG
FGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQQQQTTLGGLFSQPTQAPAQSNQLINTAS
ALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMP
NNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVI
YVIERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPA
GVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIGELQ
KNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELN
APTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIK
DDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggctccctcgggcaccgcgggcaccgctgcggccactgcagcc
cccacgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcggtgaactttaatattgggaatttcggtgttcct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggttcgga
ggatttgggacaacaactacaacagcaggttctgcattcagcttttctgctccaactaac
acaggcactacaggactctttggtggtactcagaacaaaggttttggatttggtactggt
tttggcacaacaactggaactagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacgcagcagcagcagcagcagcagcaacaaaccacattaggtggt
ctcttcagtcagcctacacaagctcctgcccagtccaaccaactcataaacactgcgagt
gctctttctgctccaacgctgttaggagacgagagagatgctattttagcgaaatggaac
caactgcaggccttttggggaacaggaaaaggctatttcaacaataatattccaccagtg
gaattcacacaagaaaatcccttttgtcgatttaaggcagtaggttatagttgtatgccc
aataataaagatgaagatgggctagtggtgttagttttcaacaaaaaagaaacagatatt
cgaagccagcaacagcaattggtagaatcgttgcataaagttttgggaggaaaccagacc
cttacagtaaatgtagagggtattaaaacattgccagatgatcagacagaagttgtcatt
tatgttattgaacgttctcccaatggtacttcaagaagagttccagctaccacactgtat
gcccattttgaacaaaccaatataaaaacccagctgcagcaacttggtgtaaccctctct
atgactagaacagaactttctcctgcacagatcaaacagcttttacagaatcctcccgct
ggtgttgatcctattatctgggagcaagccaaggtggataaccctgatcctgaaaagtta
attcctgtaccaatggtgggtttcaaagaacttcttcgaagactaaaggttcaagatcag
atgactaagcagcatcagaccagattagatattatatctgaagatattggtgaattacag
aagaatcaaactacaactatggccaaaattgcacaatacaagaggaaactcatggacctt
tcccatagaaccttacaggtcctcatcaaacaggaaattcagaggaagagtgggtatgcc
atccaagctgatgaagagcagttgcgagttcagctagatacaattcagtgtgaactaaat
gcacctactcagtttaagggccgacttaatgaactgatgtcccaaatcaggatgcagaat
cattttggagcagtcaaatctgaagaaagatactacatagatgcagatctgttacgagaa
attaagcagcatttgaaacaacaacaggaaggcctcagccatttgattagcatcataaaa
gatgacctagaagatataaaattggtagagcatggattgaatgaaaccatccacatcagg
ggtggtgtctttagttga
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